Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.1e-162 576.6 298 100.0
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.0e-136 490.3 299 82.6
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.9e-131 471.5 299 81.6
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 2.4e-130 469.2 294 82.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 5.6e-119 431.4 301 73.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 6.4e-115 417.9 297 71.0
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.5e-113 412.1 307 68.7
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 2.9e-107 392.5 306 66.7
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 8.4e-107 391.0 302 64.9
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 8.4e-107 391.0 302 64.9
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.4e-106 389.4 297 68.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.6e-100 369.4 293 63.8
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 9.9e-100 367.5 302 63.6
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 6.4e-99 364.8 295 61.7
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.4e-98 362.8 303 59.7
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.2e-98 362.5 303 59.7
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-98 362.5 296 61.1
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 4.2e-98 362.1 303 59.7
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 5.5e-98 361.7 307 61.2
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.2e-97 360.5 303 59.4
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.6e-97 358.6 300 60.0
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.0e-96 357.5 293 62.5
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.9e-96 355.5 296 59.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 6.7e-96 354.8 296 61.5
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 8.7e-96 354.4 294 60.9
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.7e-96 354.4 300 59.7
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 8.7e-96 354.4 293 60.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.1e-95 354.0 293 62.1
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 1.9e-95 353.2 305 59.3
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.9e-95 353.2 299 58.9
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.3e-95 352.4 292 62.3
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 4.3e-95 352.1 312 59.0
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 5.6e-95 351.7 252 68.7
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 9.6e-95 350.9 297 60.6
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.6e-94 350.1 334 56.9
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.8e-94 349.4 294 61.2
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.8e-94 348.6 296 61.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 8.1e-94 347.8 292 61.3
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.1e-93 347.4 305 58.0
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 2.4e-93 346.3 299 61.2
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.4e-93 346.3 296 60.1
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 9.0e-93 344.4 304 61.2
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.5e-92 343.6 295 58.3
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 2.6e-92 342.8 294 58.8
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.5e-92 342.0 292 59.6
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.7e-91 340.1 312 57.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.9e-91 339.3 294 58.8
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.4e-90 337.0 295 60.3
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.5e-90 336.3 295 58.0
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.2e-90 335.9 295 59.3
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 9.3e-90 334.3 306 56.5
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 3.5e-89 332.4 297 59.3
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 4.6e-89 332.0 297 56.9
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.3e-88 329.7 317 54.9
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 5.1e-88 328.6 298 58.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.5e-87 327.0 307 55.7
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.6e-86 323.6 295 58.0
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 2.8e-86 322.8 295 58.0
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.8e-85 320.1 315 53.0
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 5.3e-85 318.5 315 53.3
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.5e-84 317.0 314 54.1
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.4e-84 315.8 306 54.6
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 4.5e-84 315.5 294 56.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.3e-83 313.9 315 53.0
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.9e-83 312.8 313 54.3
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.8e-83 312.4 300 56.0
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 5.0e-83 312.0 315 53.3
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 5.0e-83 312.0 315 53.3
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 6.5e-83 311.6 315 53.3
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 8.4e-83 311.2 314 52.9
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.4e-82 310.5 315 53.0
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.4e-82 310.5 315 53.0
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 4.2e-82 308.9 303 56.1
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.7e-81 306.2 302 54.6
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 7.9e-81 304.7 316 52.2
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.3e-80 303.9 297 54.5
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.8e-80 303.5 295 55.6
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.0e-80 302.8 314 51.9
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 4.3e-79 298.9 307 53.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 4.3e-79 298.9 304 53.6
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.3e-78 297.4 311 50.5
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 8.2e-78 294.7 284 53.2
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.2e-78 294.7 297 55.2
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.0e-76 290.0 303 52.8
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.2e-75 286.6 299 53.2
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 1.1e-74 284.3 308 50.0
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 7.2e-74 281.6 293 52.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 7.2e-74 281.6 278 53.2
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.7e-73 279.6 265 53.2
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 6.7e-72 275.0 264 50.4
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.1e-71 274.2 295 52.9
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.2e-70 270.0 297 51.9
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.8e-69 266.9 314 48.1
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 8.5e-67 258.1 302 48.7
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 9.4e-66 254.6 257 50.2
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.8e-64 250.4 206 62.1
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.9e-64 249.2 294 51.0
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 4.4e-63 245.7 309 46.3
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.3e-62 244.2 268 49.3
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.7e-59 233.8 301 48.2
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 6.5e-59 231.9 203 59.1
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 8.5e-59 231.5 250 52.0
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.4e-53 214.2 227 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.8e-45 187.2 268 41.4
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.9e-42 177.2 262 41.2
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 5.5e-42 175.6 134 67.2
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.7e-41 172.6 187 46.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.0e-40 171.4 295 38.0
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 8.8e-40 168.3 263 39.9
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.5e-39 167.5 303 38.3
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 4.4e-39 166.0 138 55.1
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.4e-37 161.0 260 39.2
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.8e-37 160.6 126 67.5
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.6e-36 157.5 303 35.3
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 9.5e-34 148.3 297 36.4
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.6e-33 146.4 128 57.8
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 4.7e-33 146.0 126 60.3
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 8.0e-33 145.2 109 72.5
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 7.5e-31 138.7 182 44.5
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.1e-29 134.8 119 60.5
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.6e-26 122.5 119 51.3
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.6e-25 119.8 177 41.2
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.2e-25 119.0 177 41.2
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.2e-25 119.0 150 45.3
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 5.2e-24 115.9 120 55.8
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.2e-23 114.8 125 48.8
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.5e-23 114.4 139 49.6
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 4.6e-20 102.8 102 52.0
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.5e-18 97.8 159 40.9
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 8.1e-17 92.0 68 64.7
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 5.8e-15 85.9 95 50.5
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 4.4e-07 59.7 90 35.6
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 9.9e-07 58.5 61 50.8
COL.COLO4_02792 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.7e-06 57.8 63 47.6


User provided reference genes

Program Settings