Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.4e-147 525.4 252 100.0
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 3.4e-133 478.4 252 91.3
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.2e-125 453.4 253 86.6
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.3e-121 439.9 252 84.5
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 2.9e-116 422.2 254 81.1
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.1e-111 406.0 254 80.3
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.1e-106 389.4 251 77.3
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 7.8e-106 387.5 250 76.0
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 2.5e-104 382.5 229 77.7
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 7.3e-104 380.9 252 74.2
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 4.0e-102 375.2 233 76.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.0e-101 372.9 226 77.0
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.6e-101 372.5 233 76.4
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 4.5e-101 371.7 240 75.4
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 9.9e-101 370.5 220 80.0
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.3e-100 370.2 226 76.5
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.3e-100 370.2 252 72.6
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.7e-100 369.8 244 72.5
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.7e-100 369.8 227 78.9
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 4.9e-100 368.2 226 76.1
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.4e-99 365.9 230 74.8
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 4.2e-99 365.2 233 73.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.1e-98 362.8 240 74.2
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.7e-98 362.5 228 76.3
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 2.7e-98 362.5 220 79.5
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 2.7e-98 362.5 224 75.4
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.5e-98 362.1 224 75.9
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 7.9e-98 360.9 194 85.1
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.3e-97 360.1 217 77.4
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 3.0e-97 359.0 203 82.3
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 3.0e-97 359.0 224 75.4
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 3.0e-97 359.0 233 74.2
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 5.1e-97 358.2 226 74.8
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 6.7e-97 357.8 216 77.3
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 6.7e-97 357.8 221 76.5
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.1e-96 357.1 221 76.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 1.5e-96 356.7 221 76.0
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 1.9e-96 356.3 209 79.4
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 5.6e-96 354.8 227 74.4
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 5.6e-96 354.8 193 83.9
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 5.6e-96 354.8 197 83.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 7.4e-96 354.4 232 72.0
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.4e-96 354.4 233 73.4
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.6e-95 353.2 227 74.0
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.6e-95 353.2 212 77.4
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 1.6e-95 353.2 227 72.7
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.6e-95 353.2 234 72.6
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.1e-95 352.8 238 72.3
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 2.1e-95 352.8 212 78.8
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 2.1e-95 352.8 233 72.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.8e-95 352.4 194 83.0
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.8e-95 352.4 196 81.6
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 4.8e-95 351.7 241 73.4
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 4.8e-95 351.7 239 71.1
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 6.2e-95 351.3 205 80.0
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 1.8e-94 349.7 228 75.4
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.8e-94 349.7 206 79.6
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 3.1e-94 349.0 209 77.5
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 4.0e-94 348.6 196 81.6
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.5e-93 346.7 227 73.1
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 2.0e-93 346.3 194 82.5
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 3.4e-93 345.5 242 69.8
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.3e-92 343.6 222 73.0
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 4.9e-92 341.7 194 78.9
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 8.4e-92 340.9 247 69.2
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 8.4e-92 340.9 261 64.4
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.2e-91 339.0 268 66.0
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 5.5e-91 338.2 191 80.6
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 5.5e-91 338.2 211 74.9
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 7.1e-91 337.8 202 78.2
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 7.1e-91 337.8 200 77.5
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 9.3e-91 337.4 211 74.9
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.2e-90 337.0 206 76.2
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 3.5e-90 335.5 221 71.5
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.1e-88 330.5 217 73.3
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.1e-87 326.2 220 73.2
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.8e-86 323.2 234 67.5
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.2e-85 320.5 186 78.5
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.8e-85 318.2 244 63.9
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 3.2e-83 312.4 195 75.4
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 6.7e-81 304.7 212 71.7
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 5.7e-80 301.6 193 72.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 9.7e-80 300.8 191 74.3
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.8e-79 299.3 196 74.0
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.8e-79 299.3 200 72.5
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.1e-78 297.4 218 66.5
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 6.9e-78 294.7 202 66.3
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.3e-76 290.4 187 69.0
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 5.0e-76 288.5 192 68.2
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.1e-72 277.3 177 67.8
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.3e-71 273.9 190 66.3
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 5.9e-69 265.0 220 64.5
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.2e-68 263.1 176 70.5
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.0e-68 261.9 254 55.9
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 2.6e-64 249.6 180 69.4
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.0e-60 237.7 147 73.5
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.6e-56 223.0 172 61.6
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.7e-55 219.2 192 59.4
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.8e-55 218.8 192 58.9
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.4e-54 217.2 137 76.6
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.9e-51 206.8 199 55.8
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 2.5e-51 206.5 196 51.0
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 3.7e-47 192.6 200 53.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 3.1e-46 189.5 111 77.5
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.8e-41 173.7 103 73.8
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.3e-41 173.3 149 52.3
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 7.0e-38 161.8 105 70.5
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.9e-35 153.7 234 47.0
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 2.9e-28 129.8 71 87.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.6e-26 124.0 67 80.6
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 1.2e-10 71.2 56 58.9


User provided reference genes

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