Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-130 468.0 227 100.0
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-108 395.6 227 83.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-107 392.5 227 83.7
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.8e-105 384.0 227 81.1
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-104 381.7 227 79.7
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.4e-99 364.4 228 79.4
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-99 364.0 208 83.7
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 5.4e-98 361.3 227 78.4
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-97 360.1 208 83.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-97 359.8 227 76.2
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 6.0e-97 357.8 225 77.8
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.6e-95 350.5 227 74.9
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 5.4e-90 334.7 219 74.0
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-89 331.3 225 71.1
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.6e-88 327.8 225 70.7
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 4.3e-87 325.1 223 72.2
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 9.6e-79 297.4 227 67.4
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-71 273.5 226 64.2
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-70 269.2 224 61.6
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.8e-67 258.8 224 56.2
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 3.2e-66 255.8 223 56.5
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.8e-64 250.0 222 54.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.8e-64 250.0 222 54.5
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.7e-63 245.0 223 54.3
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 9.7e-63 244.2 223 52.0
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-62 243.8 215 60.5
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 3.7e-62 242.3 223 54.3
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.2e-62 241.1 221 54.8
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-61 240.4 223 53.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.8e-61 240.0 225 53.8
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.8e-61 240.0 224 51.3
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 4.1e-61 238.8 224 50.9
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-60 236.9 224 52.7
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-60 236.5 219 51.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.4e-60 235.7 225 52.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.4e-60 235.7 225 52.9
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-60 235.0 225 52.0
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 7.7e-60 234.6 225 52.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-59 233.4 225 52.0
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.9e-59 232.6 269 44.2
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-59 232.3 223 52.0
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-58 229.6 225 50.7
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.2e-58 228.0 225 50.7
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-57 226.9 207 55.1
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.4e-56 223.8 224 50.4
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.1e-56 221.9 224 49.6
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 5.1e-56 221.9 224 49.6
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 6.7e-56 221.5 225 50.2
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 6.7e-56 221.5 226 50.0
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-55 219.5 135 78.5
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.8e-54 216.1 224 48.2
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.3e-54 214.9 224 47.8
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 4.5e-52 208.8 225 47.1
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-50 203.8 226 46.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 2.5e-50 203.0 136 75.0
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 4.2e-50 202.2 219 47.9
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 2.1e-49 199.9 228 48.2
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 4.7e-49 198.7 223 46.6
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 5.7e-47 191.8 224 46.0
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 5.7e-47 191.8 224 46.0
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 5.7e-47 191.8 224 46.0
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-46 190.3 126 71.4
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.3e-46 188.3 225 45.3
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 2.4e-45 186.4 234 44.9
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.5e-44 182.2 223 46.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-43 180.3 171 52.6
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.9e-43 179.5 223 43.5
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 6.5e-43 178.3 223 43.9
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-42 176.8 235 42.6
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.5e-42 176.4 221 46.6
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-41 173.7 219 44.7
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.7e-41 172.9 223 44.4
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-40 169.1 144 59.0
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.3e-38 164.1 232 39.2
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.7e-38 163.7 226 39.4
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 6.3e-38 161.8 208 45.2
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.4e-37 159.8 224 43.3
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 7.0e-37 158.3 227 43.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 7.0e-37 158.3 165 49.7
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-36 157.5 220 41.4
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.6e-36 157.1 145 52.4
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.5e-36 155.6 225 39.1
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 4.5e-36 155.6 223 42.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.0e-35 154.5 127 58.3
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-34 149.4 199 44.7
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 4.2e-34 149.1 211 38.9
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.2e-34 148.3 226 37.6
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 7.2e-34 148.3 222 41.0
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-33 147.1 224 39.7
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-33 147.1 224 39.7
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 3.6e-33 146.0 216 41.2
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 8.0e-33 144.8 196 44.4
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 8.0e-33 144.8 193 42.5
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-32 144.4 221 39.4
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.4e-32 144.1 143 50.3
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 5.2e-32 142.1 221 39.8
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-31 140.6 223 36.8
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-31 140.6 221 37.6
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 4.4e-31 139.0 230 37.4
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-30 137.5 140 49.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.7e-30 137.1 164 43.3
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 6.3e-30 135.2 237 37.1
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-29 134.4 237 37.6
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-29 134.4 301 30.9
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.0e-28 130.2 196 36.7
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.5e-28 129.0 182 40.7
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-27 127.1 134 47.0
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-27 127.1 134 47.0
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.8e-27 125.9 130 45.4
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-26 124.0 123 56.9
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.2e-26 122.9 199 37.7
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.8e-24 117.1 209 37.3
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-24 117.1 227 35.7
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.5e-23 111.7 220 31.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 6.3e-22 108.6 121 47.9
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 6.3e-22 108.6 136 47.1
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-21 107.1 110 50.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.2e-20 104.4 125 44.0
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 2.7e-20 103.2 238 33.2
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-19 99.8 179 36.3
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.0e-16 91.3 209 34.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.4e-16 90.9 136 39.7
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.0e-16 89.7 163 33.1
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 5.2e-16 89.0 133 39.8
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 5.4e-13 79.0 102 41.2
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 9.2e-13 78.2 93 41.9
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.7e-12 76.6 111 36.9
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 3.5e-12 76.3 76 47.4
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.0e-11 72.4 96 41.7
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.6e-09 67.4 89 37.1
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.8e-08 63.9 73 47.9
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-07 60.1 86 39.5
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-06 56.2 69 42.0


User provided reference genes

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