Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 4.9e-109 397.9 213 100.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 3.1e-103 378.6 213 93.9
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 9.6e-97 357.1 219 90.4
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.7e-93 346.3 218 88.1
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.8e-90 336.3 211 77.3
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 2.1e-88 329.3 212 78.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 6.2e-88 327.8 221 76.9
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 6.2e-88 327.8 221 76.9
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 3.2e-84 315.5 217 72.8
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 2.7e-83 312.4 217 73.7
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 3.5e-83 312.0 213 72.8
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 1.1e-81 307.0 208 77.4
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 6.2e-80 301.2 209 74.2
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 8.2e-80 300.8 208 71.2
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 5.3e-79 298.1 203 71.9
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.5e-78 296.6 209 71.3
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.6e-78 295.8 208 71.2
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.0e-77 293.9 204 72.1
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.7e-77 293.1 202 73.8
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.7e-77 293.1 202 73.8
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 5.0e-77 291.6 204 74.5
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 6.5e-77 291.2 215 74.4
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 8.4e-77 290.8 203 72.4
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 7.2e-76 287.7 204 72.1
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 4.6e-75 285.0 210 74.8
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 5.1e-74 281.6 210 68.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 8.7e-74 280.8 211 71.6
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.1e-73 280.4 210 66.7
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.5e-73 279.3 211 66.8
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.3e-73 278.5 211 66.8
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.3e-72 276.9 211 66.4
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.2e-72 276.2 206 67.5
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 1.1e-71 273.9 209 66.0
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.1e-71 273.9 213 67.1
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.4e-71 272.7 208 70.7
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 5.9e-70 268.1 209 65.1
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.3e-69 266.9 210 69.0
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 1.4e-68 263.5 212 71.2
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.9e-68 263.1 212 68.9
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 2.5e-68 262.7 215 65.6
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 2.5e-68 262.7 186 79.6
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.2e-68 262.3 211 69.2
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 9.4e-68 260.8 201 74.6
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.2e-67 260.4 213 67.1
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.2e-67 260.4 220 61.4
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.2e-67 260.4 208 65.4
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.2e-67 260.4 209 65.6
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.6e-67 260.0 211 69.2
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 2.1e-67 259.6 214 66.4
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.7e-67 259.2 207 68.6
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 2.7e-67 259.2 194 65.5
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 2.7e-67 259.2 194 64.9
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 2.7e-67 259.2 202 67.8
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 3.6e-67 258.8 198 64.6
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 7.9e-67 257.7 211 66.4
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.4e-66 256.9 207 65.7
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.3e-66 256.1 210 61.9
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 3.0e-66 255.8 208 62.0
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 3.9e-66 255.4 212 62.3
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.5e-65 252.7 208 61.5
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 3.3e-65 252.3 197 70.1
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.3e-65 251.9 201 71.1
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 5.7e-65 251.5 201 64.2
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.4e-65 251.1 203 65.5
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.2e-64 249.6 180 68.9
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.8e-64 249.2 208 61.5
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.4e-63 246.9 147 80.3
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.8e-63 246.5 145 82.1
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.8e-63 246.5 203 64.5
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 2.4e-63 246.1 207 60.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 2.4e-63 246.1 201 61.2
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 6.9e-63 244.6 215 62.8
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 2.6e-62 242.7 213 59.6
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 5.9e-62 241.5 196 69.4
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.8e-61 238.8 211 59.7
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.8e-61 238.8 187 69.0
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 5.5e-60 235.0 137 81.0
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 2.7e-59 232.6 204 58.3
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 3.6e-59 232.3 204 57.8
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 4.7e-59 231.9 204 57.8
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 4.7e-59 231.9 204 57.8
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 6.1e-59 231.5 203 58.6
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 6.1e-59 231.5 199 60.3
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.4e-58 230.3 195 61.0
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.8e-58 229.9 194 60.3
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.8e-58 229.9 173 71.7
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 3.9e-58 228.8 204 56.9
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 3.9e-58 228.8 203 59.1
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 8.8e-58 227.6 204 56.4
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 2.0e-57 226.5 206 59.2
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 7.4e-57 224.6 206 58.3
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.4e-55 220.3 206 57.8
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 9.1e-55 217.6 136 74.3
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 3.5e-54 215.7 142 71.8
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 4.5e-54 215.3 211 56.4
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 4.4e-49 198.7 131 73.3
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 4.8e-48 195.3 129 71.3
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.2e-46 190.7 152 70.4
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 4.0e-42 175.6 91 90.1
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 5.2e-42 175.3 113 71.7
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 7.5e-41 171.4 133 60.2
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.7e-40 170.2 139 59.7
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.5e-36 156.4 137 55.5
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 3.2e-36 156.0 137 59.1
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 5.2e-34 148.7 112 60.7
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.8e-33 144.4 174 49.4
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 5.9e-30 135.2 177 44.6
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.2e-26 122.1 109 62.4
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.5e-25 120.6 196 39.8
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 5.4e-23 112.1 75 69.3
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 5.0e-13 79.0 114 40.4


User provided reference genes

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