Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 5.7e-92 340.9 170 100.0
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 2.9e-80 302.0 170 90.0
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 1.3e-72 276.6 166 84.9
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 4.2e-71 271.6 173 85.0
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 4.9e-59 231.5 167 74.9
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 9.2e-58 227.3 160 73.8
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.2e-57 226.9 163 71.8
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 2.0e-52 209.5 165 70.3
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.0e-48 197.2 178 63.5
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 9.2e-42 174.1 142 65.5
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.0e-40 170.6 179 57.5
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.1e-39 167.2 183 55.7
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 1.5e-39 166.8 185 54.6
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 2.8e-38 162.5 184 52.7
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 6.2e-38 161.4 185 53.0
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 8.1e-38 161.0 154 59.1
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 8.1e-38 161.0 189 50.8
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 8.1e-38 161.0 181 54.1
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 2.3e-37 159.5 210 49.5
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 4.0e-37 158.7 184 51.1
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.2e-36 157.1 195 51.8
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.0e-36 156.4 154 58.4
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 2.2e-35 152.9 189 52.4
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 2.4e-34 149.4 205 46.3
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 5.4e-34 148.3 194 46.4
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 9.2e-34 147.5 194 46.4
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.2e-33 147.1 183 49.2
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.7e-33 146.0 194 45.9
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 6.0e-33 144.8 197 48.2
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 5.1e-32 141.7 192 46.4
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.9e-31 139.8 190 52.1
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.3e-31 139.0 190 50.0
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 3.3e-31 139.0 190 50.0
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.2e-30 137.1 190 49.5
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.8e-30 136.0 194 49.5
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.8e-30 136.0 172 47.7
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 6.2e-30 134.8 178 48.3
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 8.1e-30 134.4 173 48.0
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 8.1e-30 134.4 192 47.9
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.1e-29 134.0 206 43.2
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 4.0e-29 132.1 170 47.6
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.2e-28 130.6 190 47.4
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 1.2e-28 130.6 196 42.3
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 2.2e-27 126.3 189 47.6
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 2.4e-26 122.9 209 43.5
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 2.4e-26 122.9 167 46.1
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 3.2e-26 122.5 192 44.8
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 4.1e-26 122.1 168 46.4
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 7.1e-26 121.3 202 42.6
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 2.1e-25 119.8 201 44.8
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 4.6e-25 118.6 197 43.7
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 7.8e-25 117.9 150 46.7
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 3.0e-24 115.9 188 43.1
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 3.0e-24 115.9 185 44.9
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 3.9e-24 115.5 189 44.4
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 5.1e-24 115.2 168 46.4
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 8.6e-24 114.4 194 42.3
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.1e-23 114.0 190 42.1
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 3.6e-22 109.0 200 39.5
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 6.2e-22 108.2 168 45.8
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-21 106.3 164 45.7
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.4e-20 102.4 195 38.5
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.1e-18 97.4 222 35.1
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 1.4e-18 97.1 166 43.4
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.4e-18 96.3 178 40.4
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 4.2e-18 95.5 183 38.3
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.2e-17 94.0 229 35.4
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 1.6e-17 93.6 227 35.2
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 1.6e-17 93.6 229 35.8
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 2.1e-17 93.2 221 35.3
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 2.7e-17 92.8 191 40.8
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 3.5e-17 92.4 233 34.8
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 4.6e-17 92.0 229 35.4
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 6.0e-17 91.7 233 33.9
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.0e-16 90.9 206 37.4
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.0e-16 90.9 206 37.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.3e-16 90.5 158 41.8
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 1.7e-16 90.1 229 33.2
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 2.3e-16 89.7 178 41.6
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 3.0e-16 89.4 226 34.5
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 6.6e-16 88.2 225 33.3
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 1.1e-15 87.4 106 49.1
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.9e-15 86.7 233 33.9
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.9e-15 86.7 169 38.5
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 2.5e-15 86.3 221 33.5
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 3.3e-15 85.9 226 31.9
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 7.3e-15 84.7 168 41.7
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 1.1e-13 80.9 214 33.6
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 1.1e-13 80.9 169 38.5
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 1.4e-13 80.5 225 32.9
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 3.1e-13 79.3 131 41.2
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 1.5e-12 77.0 230 31.7
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.7e-11 73.6 175 35.4
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 6.4e-11 71.6 172 36.0
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 8.4e-11 71.2 220 31.4
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 1.3e-08 63.9 203 30.5
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 6.7e-08 61.6 203 30.5
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 4.3e-07 58.9 128 35.9
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 4.3e-07 58.9 221 29.4
Ah.03g139000 Amaranthus hybridus HOM05D007332 ORTHO05D009297 2.1e-06 56.6 165 37.0


User provided reference genes

Program Settings