Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.2e-65 253.1 129 100.0
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 7.9e-62 240.4 127 95.3
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.5e-60 236.1 127 92.1
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.3e-51 206.5 126 81.7
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 6.3e-51 204.1 126 80.2
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 5.3e-50 201.1 129 76.0
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 1.2e-49 199.9 126 77.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 5.5e-47 191.0 130 76.9
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 3.0e-45 185.3 127 71.7
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 5.2e-45 184.5 121 74.4
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 5.2e-45 184.5 132 73.5
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 8.8e-45 183.7 123 74.8
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.2e-44 183.3 124 71.8
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.5e-44 183.0 132 72.7
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 3.3e-44 181.8 119 77.3
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 3.3e-44 181.8 123 68.3
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 3.3e-44 181.8 123 68.3
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 4.4e-44 181.4 118 74.6
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 5.7e-44 181.0 124 70.2
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 5.7e-44 181.0 123 69.9
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 7.5e-44 180.6 126 70.6
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 9.7e-44 180.3 119 73.9
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.7e-43 179.5 122 69.7
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 4.8e-43 177.9 123 69.1
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 4.8e-43 177.9 123 69.1
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 4.8e-43 177.9 119 70.6
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.8e-43 177.9 118 71.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 6.3e-43 177.6 124 70.2
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 6.3e-43 177.6 120 71.7
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 8.2e-43 177.2 123 71.5
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 8.2e-43 177.2 123 71.5
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.1e-42 176.8 119 71.4
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.8e-42 176.0 122 70.5
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 2.4e-42 175.6 118 71.2
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 5.3e-42 174.5 124 69.4
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 7.0e-42 174.1 124 67.7
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 9.1e-42 173.7 127 67.7
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 9.1e-42 173.7 123 69.9
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.2e-41 173.3 123 69.9
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.6e-41 172.9 118 71.2
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.6e-41 172.9 124 67.7
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 1.6e-41 172.9 127 66.9
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.0e-41 172.6 119 68.9
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.7e-41 172.2 119 71.4
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 5.9e-41 171.0 124 67.7
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 5.9e-41 171.0 119 69.7
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.0e-40 170.2 118 70.3
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.0e-40 170.2 124 66.9
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 1.3e-40 169.9 121 67.8
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.3e-40 169.9 121 67.8
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.7e-40 169.5 123 65.9
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.7e-40 169.5 117 75.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.7e-40 169.5 118 71.2
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 67.7
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 67.7
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.8e-40 168.3 121 66.9
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 6.5e-40 167.5 123 65.0
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.9e-39 166.0 104 76.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 3.2e-39 165.2 120 67.5
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 3.2e-39 165.2 124 63.7
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 4.2e-39 164.9 119 67.2
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 5.5e-39 164.5 129 60.5
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.2e-39 164.1 105 75.2
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 7.2e-39 164.1 127 64.6
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 9.4e-39 163.7 135 63.7
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 9.4e-39 163.7 123 65.0
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 1.2e-38 163.3 119 69.7
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.6e-38 162.9 124 66.1
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 1.6e-38 162.9 147 61.2
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.6e-38 162.9 123 66.7
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 2.1e-38 162.5 124 66.1
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.1e-38 162.5 124 64.5
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 3.6e-38 161.8 124 64.5
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 3.6e-38 161.8 124 62.9
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 4.7e-38 161.4 124 64.5
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 4.7e-38 161.4 124 64.5
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 4.7e-38 161.4 124 64.5
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 6.1e-38 161.0 119 65.5
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.4e-37 159.8 124 64.5
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.4e-37 159.8 124 64.5
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 1.4e-37 159.8 122 63.9
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.8e-37 159.5 105 71.4
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.3e-37 159.1 124 63.7
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 3.0e-37 158.7 124 63.7
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 3.0e-37 158.7 124 63.7
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 3.0e-37 158.7 124 63.7
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 3.0e-37 158.7 121 64.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 5.2e-37 157.9 119 65.5
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 8.8e-37 157.1 124 64.5
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 8.8e-37 157.1 146 55.5
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 8.8e-37 157.1 122 63.1
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 2.0e-36 156.0 112 67.9
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 4.4e-36 154.8 105 69.5
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 5.7e-36 154.5 127 59.8
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 1.7e-35 152.9 117 65.8
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.2e-35 152.5 144 54.9
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 6.3e-35 151.0 102 71.6
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 1.1e-34 150.2 119 62.2
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.3e-32 143.3 130 56.9
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.7e-32 142.9 89 75.3
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 3.8e-32 141.7 121 59.5
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.9e-31 139.4 120 56.7
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 1.9e-31 139.4 132 51.5
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 3.2e-31 138.7 121 58.7
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 3.2e-31 138.7 216 40.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 4.2e-31 138.3 132 56.1
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 5.5e-31 137.9 101 61.4
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 9.5e-31 137.1 88 73.9
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 8.0e-30 134.0 124 56.5
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.4e-29 133.3 89 71.9
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.4e-29 133.3 107 61.7
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.5e-28 129.8 105 61.9
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.4e-28 128.3 81 76.5
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 1.4e-26 123.2 83 69.9
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 2.4e-26 122.5 86 70.9
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 3.1e-26 122.1 75 80.0
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 7.8e-25 117.5 74 75.7
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 1.9e-23 112.8 68 75.0
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 5.6e-23 111.3 126 43.7
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 4.4e-20 101.7 95 55.8
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.3e-19 100.1 117 41.9
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 3.2e-18 95.5 61 77.0
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.2e-18 95.5 73 63.0
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.2e-17 93.6 73 58.9
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 2.3e-16 89.4 88 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 4.3e-15 85.1 88 44.3
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 1.1e-07 60.5 149 32.2
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.9e-07 59.7 109 33.0
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 7.3e-07 57.8 45 60.0


User provided reference genes

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