Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 4.1e-195 684.5 330 100.0
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.4e-190 669.5 330 97.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 9.1e-187 656.8 330 95.5
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 3.8e-185 651.4 331 94.6
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.3e-182 642.1 330 91.5
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.0e-178 629.0 331 91.2
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 2.2e-177 625.5 330 90.0
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.1e-176 623.2 330 89.7
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.5e-176 622.1 330 88.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.1e-175 619.0 330 88.8
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.8e-174 615.9 326 87.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.2e-173 613.2 326 88.3
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.7e-172 609.4 326 85.6
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 9.1e-171 603.6 317 89.3
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 9.1e-171 603.6 317 89.3
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.2e-170 603.2 326 85.6
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.0e-170 602.4 326 84.4
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.0e-169 600.1 326 84.7
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 5.0e-169 597.8 326 85.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 5.0e-169 597.8 325 84.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 5.5e-168 594.3 326 85.3
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 9.4e-168 593.6 330 85.8
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 6.1e-167 590.9 338 84.6
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 3.0e-166 588.6 326 83.7
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 5.7e-165 584.3 326 83.4
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.8e-164 581.3 326 82.2
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 6.3e-164 580.9 326 81.6
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.1e-163 580.1 326 81.3
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.8e-163 579.3 326 82.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.6e-162 576.2 326 80.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.6e-162 576.2 326 80.7
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.5e-162 575.1 327 81.0
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 7.7e-162 573.9 326 80.1
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.0e-161 573.5 323 82.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.3e-161 573.2 327 80.4
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.7e-161 572.8 326 81.0
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.9e-161 572.0 327 80.7
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 3.8e-161 571.6 326 80.7
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.5e-160 569.7 310 83.5
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.3e-160 568.5 327 80.4
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.3e-160 568.5 326 78.2
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 4.2e-160 568.2 326 78.5
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.6e-159 566.2 328 80.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 1.8e-158 562.8 325 81.2
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.8e-158 562.8 326 77.9
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 8.9e-158 560.5 326 76.7
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.0e-157 559.3 325 80.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 3.4e-157 558.5 326 80.1
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 5.7e-157 557.8 326 82.2
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.7e-157 557.8 329 75.7
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 7.5e-157 557.4 325 79.7
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.3e-156 556.6 325 79.1
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.3e-156 556.6 339 79.1
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.7e-156 556.2 326 77.0
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 3.7e-156 555.1 325 79.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 3.7e-156 555.1 325 80.3
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 4.9e-156 554.7 326 76.7
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 8.3e-156 553.9 324 79.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.4e-155 553.1 341 77.4
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.4e-155 553.1 341 77.4
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 4.1e-155 551.6 330 74.8
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 9.2e-155 550.4 338 77.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 1.0e-153 547.0 320 78.8
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.0e-153 547.0 323 76.8
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 6.6e-153 544.3 325 77.5
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.5e-152 543.1 326 75.5
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 7.3e-152 540.8 325 77.2
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 7.3e-152 540.8 326 75.8
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 8.0e-151 537.3 326 76.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 5.2e-150 534.6 320 76.6
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 5.8e-149 531.2 313 79.2
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.7e-148 529.6 326 73.6
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 4.9e-148 528.1 323 74.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 3.5e-146 521.9 326 73.9
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.6e-146 521.5 327 73.4
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.3e-145 519.2 327 73.1
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 5.0e-145 518.1 301 77.1
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 6.6e-145 517.7 326 73.0
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.9e-144 516.2 326 72.7
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.1e-143 512.7 325 70.5
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 6.2e-143 511.1 326 74.5
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-142 510.4 326 71.8
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.8e-141 504.6 326 72.7
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.9e-139 499.6 324 71.6
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.4e-139 499.2 315 72.1
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 6.0e-138 494.6 310 72.9
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 4.3e-136 488.4 326 72.1
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.5e-133 479.9 253 86.2
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.1e-128 463.8 255 83.5
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.4e-126 456.8 325 64.6
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.4e-126 456.1 325 64.3
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.5e-125 453.4 319 67.1
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.4e-123 446.8 254 81.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.4e-123 446.0 256 80.1
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.4e-123 446.0 329 62.0
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.2e-122 443.7 238 87.0
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.7e-121 439.9 309 64.7
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 1.1e-120 437.2 302 65.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.1e-120 437.2 326 65.3
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.9e-115 419.9 275 70.2
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.1e-112 410.6 254 75.2
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.1e-112 410.6 317 57.7
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 1.1e-110 404.1 309 58.9
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 9.6e-104 380.9 220 83.6
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.1e-95 353.2 198 81.8
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 3.2e-91 339.3 326 50.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 4.3e-88 328.9 170 87.6
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 5.7e-64 248.8 143 83.2
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.2e-63 246.9 132 90.2
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 7.2e-51 205.3 114 81.6
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 2.2e-47 193.7 314 37.6
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.9e-47 192.6 143 58.7
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.6e-45 187.6 281 37.4
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.8e-38 164.1 309 33.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 9.5e-35 151.8 82 84.1
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 8.9e-33 145.2 109 60.6
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.4e-32 142.9 111 67.6
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 6.4e-31 139.0 133 54.1
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 2.7e-29 133.7 78 83.3
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 6.8e-25 119.0 72 75.0
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 6.8e-25 119.0 68 70.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 3.9e-20 103.2 58 77.6
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.1e-14 83.2 69 53.6
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.1e-11 75.1 62 61.3
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-08 65.1 40 65.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.2e-07 60.8 36 72.2


User provided reference genes

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