Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.8e-224 782.3 413 100.0
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.2e-214 748.8 413 95.6
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 2.5e-210 735.3 413 94.9
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 3.5e-196 688.3 413 88.1
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 3.6e-193 678.3 412 85.2
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 2.4e-189 665.6 411 86.4
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 7.1e-189 664.1 414 85.0
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 9.3e-189 663.7 413 85.0
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.9e-187 658.3 432 77.8
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-186 656.8 432 77.8
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 4.8e-185 651.4 384 84.1
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.3e-184 647.9 365 90.1
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 9.0e-184 647.1 416 81.0
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.6e-183 645.6 432 78.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 7.6e-183 644.0 432 79.4
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 1.7e-182 642.9 414 80.4
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 2.2e-182 642.5 415 78.3
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.8e-182 641.7 412 80.6
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 3.8e-182 641.7 412 80.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 4.9e-182 641.3 433 77.6
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 4.9e-182 641.3 425 80.5
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 8.4e-182 640.6 363 88.7
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.1e-181 640.2 412 81.6
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 1.1e-181 640.2 409 84.6
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.4e-181 639.8 435 81.1
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 1.4e-181 639.8 427 79.6
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.4e-181 639.8 435 80.0
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 1.9e-181 639.4 415 80.5
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.5e-181 639.0 425 77.6
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 2.5e-181 639.0 429 81.4
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 4.2e-181 638.3 409 82.2
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 5.5e-181 637.9 432 78.7
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 5.5e-181 637.9 432 78.7
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 5.5e-181 637.9 432 80.1
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 7.1e-181 637.5 415 78.1
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 7.1e-181 637.5 432 80.3
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 7.1e-181 637.5 415 80.7
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 9.3e-181 637.1 413 80.1
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.2e-180 636.7 408 82.8
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.6e-180 636.3 456 77.6
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 1.6e-180 636.3 425 78.4
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.6e-180 636.3 432 76.4
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 2.1e-180 636.0 412 80.1
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 3.5e-180 635.2 415 78.3
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.5e-180 635.2 416 79.6
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 4.6e-180 634.8 429 75.5
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 4.6e-180 634.8 439 79.7
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 4.6e-180 634.8 432 81.0
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 6.0e-180 634.4 432 78.0
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 6.0e-180 634.4 362 88.4
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 6.0e-180 634.4 365 86.0
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 6.0e-180 634.4 365 88.2
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 7.9e-180 634.0 386 84.7
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 7.9e-180 634.0 413 82.8
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.8e-179 632.9 414 81.9
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.3e-179 632.5 432 78.0
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 3.0e-179 632.1 412 79.1
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 3.0e-179 632.1 412 79.1
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 3.0e-179 632.1 418 77.3
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 6.7e-179 630.9 412 82.5
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 6.7e-179 630.9 365 85.2
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 8.7e-179 630.6 430 80.7
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.1e-178 630.2 412 78.9
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-178 630.2 328 94.2
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 1.5e-178 629.8 365 88.8
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 1.9e-178 629.4 431 79.8
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.9e-178 629.4 432 79.9
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.5e-178 629.0 440 77.5
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 7.4e-178 627.5 412 80.6
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 7.4e-178 627.5 427 77.0
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 9.6e-178 627.1 417 79.4
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 9.6e-178 627.1 431 80.3
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 9.6e-178 627.1 420 80.7
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.3e-177 626.7 440 76.8
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-177 626.7 365 87.9
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.6e-177 626.3 414 79.5
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 1.6e-177 626.3 363 84.6
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.8e-177 625.5 363 84.8
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.8e-177 624.8 427 79.9
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 6.2e-177 624.4 365 87.4
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 8.2e-177 624.0 395 80.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.1e-176 623.6 365 87.4
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 5.3e-176 621.3 438 74.9
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 2.6e-175 619.0 406 76.1
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 8.4e-174 614.0 328 91.2
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.2e-172 610.1 399 82.7
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.5e-172 608.6 409 77.3
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.0e-171 607.1 378 84.1
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 3.0e-171 605.5 409 81.4
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 3.0e-171 605.5 327 90.2
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.7e-171 604.4 409 80.9
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 8.7e-171 604.0 407 81.1
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 8.7e-171 604.0 407 81.1
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.1e-170 603.6 409 80.9
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.2e-166 589.3 412 77.4
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.9e-166 589.0 428 74.3
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 3.2e-165 585.5 365 81.4
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 3.2e-165 585.5 356 82.0
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 4.2e-165 585.1 431 76.3
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.2e-165 585.1 431 76.3
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.0e-163 580.5 356 81.2
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 5.1e-163 578.2 412 71.8
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.0e-162 576.2 315 88.9
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 4.1e-160 568.5 363 75.8
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.4e-157 560.1 365 81.1
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 3.2e-157 558.9 361 78.1
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 4.2e-157 558.5 358 76.0
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.1e-156 556.2 434 72.8
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.7e-156 555.8 358 75.4
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.3e-155 552.7 410 68.8
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.3e-155 552.7 365 82.2
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.5e-154 550.1 358 74.6
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 9.7e-154 547.4 382 71.5
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 2.5e-149 532.7 317 85.5
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 1.4e-144 516.9 283 89.4
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 3.8e-142 508.8 305 81.6
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 4.7e-140 501.9 442 66.5
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.6e-138 496.1 309 79.3
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 3.7e-137 492.3 327 74.0
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.7e-137 492.3 325 74.8
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.3e-137 491.5 366 73.8
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 5.4e-136 488.4 330 81.8
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 2.7e-135 486.1 433 60.5
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 3.5e-135 485.7 327 73.4
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.5e-135 485.3 327 73.7
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 5.0e-134 481.9 327 73.1
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 2.5e-133 479.6 327 73.7
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 5.5e-133 478.4 325 73.2
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 5.5e-133 478.4 325 73.2
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 5.5e-133 478.4 325 73.2
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 2.3e-131 473.0 327 72.2
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 8.8e-131 471.1 327 71.9
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 8.6e-118 427.9 335 61.2
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 3.6e-116 422.5 312 67.0
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 4.7e-116 422.2 330 62.1
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 4.0e-115 419.1 307 73.0
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.4e-113 411.8 282 73.0
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 5.0e-110 402.1 224 89.3
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 3.5e-103 379.4 328 64.3
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 5.1e-102 375.6 300 69.3
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 4.7e-92 342.4 268 70.1
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.4e-75 287.0 234 65.0
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.0e-75 285.0 192 74.0
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 6.9e-67 258.8 249 57.0
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-61 241.5 276 48.6
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-56 224.9 123 84.6
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.3e-54 217.2 279 48.4
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.6e-50 203.8 186 57.0
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 8.5e-49 198.7 307 38.1
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 2.1e-47 194.1 186 54.8
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 5.1e-46 189.5 101 87.1
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.7e-46 189.1 148 66.9
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 4.8e-44 183.0 101 84.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.8e-43 181.0 104 85.6
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 5.3e-43 179.5 100 88.0
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 1.1e-40 171.8 184 50.0
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 3.2e-40 170.2 182 50.0
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 7.2e-40 169.1 100 80.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 7.4e-37 159.1 77 93.5
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-36 158.3 175 57.7
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 1.1e-35 155.2 122 68.9
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 4.1e-35 153.3 211 39.8
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.0e-33 148.7 76 86.8
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 3.8e-33 146.7 182 47.3
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 7.2e-32 142.5 135 59.3
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.1e-27 125.6 72 87.5
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.0e-22 110.2 74 74.3
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 3.7e-20 103.6 106 54.7
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 8.5e-17 92.4 122 45.9
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 8.5e-17 92.4 122 45.9
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 3.4e-13 80.5 49 81.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.4e-11 74.3 53 66.0
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 4.1e-11 73.6 185 32.4
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 1.5e-08 65.1 59 61.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.9e-08 64.7 35 91.4
Psat5g087760 Pisum sativum HOM05D003910 ORTHO05D004622 1.9e-08 64.7 65 49.2


User provided reference genes

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