Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 5.9e-71 270.8 138 100.0
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 5.5e-61 237.7 138 88.4
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.7e-57 224.9 139 86.3
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 3.1e-56 221.9 139 84.2
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 2.9e-46 188.7 143 71.3
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 2.9e-46 188.7 143 71.3
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.9e-45 186.0 130 74.6
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 2.5e-45 185.7 143 72.7
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 4.2e-45 184.9 134 73.9
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.6e-44 183.0 138 72.5
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 2.1e-44 182.6 136 69.1
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.6e-44 181.8 141 69.5
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 8.0e-44 180.6 103 84.5
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 2.3e-43 179.1 141 68.1
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 5.2e-43 177.9 141 68.1
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.5e-42 176.4 134 69.4
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 5.7e-42 174.5 138 67.4
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 5.7e-42 174.5 106 79.2
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 5.7e-42 174.5 136 66.9
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 7.5e-42 174.1 127 70.9
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 7.5e-42 174.1 128 72.7
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 7.5e-42 174.1 128 68.8
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 7.5e-42 174.1 131 71.0
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 1.3e-41 173.3 111 79.3
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.7e-41 172.9 131 68.7
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.2e-41 172.6 131 67.9
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.2e-41 172.6 131 68.7
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.8e-41 172.2 111 80.2
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.7e-41 171.8 144 66.7
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 4.8e-41 171.4 144 66.7
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 4.8e-41 171.4 140 65.7
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 6.3e-41 171.0 127 70.1
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.1e-40 170.2 129 69.8
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 2.4e-40 169.1 132 68.9
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 2.4e-40 169.1 140 64.3
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 3.1e-40 168.7 130 69.2
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 3.1e-40 168.7 103 80.6
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.1e-40 168.3 146 64.4
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 5.4e-40 167.9 112 74.1
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 9.1e-40 167.2 108 78.7
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.2e-39 166.8 130 66.2
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.6e-39 166.4 100 81.0
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 7.7e-39 164.1 127 69.3
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.8e-38 161.8 104 76.0
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 6.5e-38 161.0 143 61.5
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 8.5e-38 160.6 145 60.7
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 1.9e-37 159.5 145 60.0
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.9e-37 159.5 95 77.9
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 2.5e-37 159.1 119 69.7
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.2e-36 156.8 138 62.3
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.6e-36 156.4 93 79.6
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 2.1e-36 156.0 103 73.8
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 2.1e-36 156.0 144 61.1
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 2.7e-36 155.6 97 79.4
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 4.7e-36 154.8 148 60.8
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 8.0e-36 154.1 108 71.3
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.8e-35 152.9 108 71.3
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 8.8e-35 150.6 112 67.9
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.2e-34 150.2 113 69.0
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.0e-34 149.4 133 60.2
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 2.6e-34 149.1 103 71.8
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 7.5e-34 147.5 141 60.3
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 9.8e-34 147.1 99 72.7
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 9.8e-34 147.1 112 66.1
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.3e-33 146.7 130 57.7
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 3.7e-33 145.2 121 64.5
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 3.7e-33 145.2 110 67.3
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 4.9e-33 144.8 124 63.7
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 4.9e-33 144.8 124 56.5
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 1.1e-32 143.7 99 71.7
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 1.1e-32 143.7 99 71.7
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 1.4e-32 143.3 138 54.3
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 1.8e-32 142.9 80 85.0
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 3.1e-32 142.1 110 66.4
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 5.4e-32 141.4 143 56.6
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 7.0e-32 141.0 109 66.1
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 7.0e-32 141.0 113 65.5
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.7e-31 139.0 112 67.0
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 4.5e-31 138.3 107 65.4
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.0e-30 137.1 102 67.6
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 1.7e-30 136.3 120 62.5
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.9e-29 132.9 90 72.2
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.3e-29 132.1 121 61.2
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 3.3e-29 132.1 102 62.7
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 4.2e-29 131.7 83 77.1
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 9.5e-29 130.6 144 53.5
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 9.5e-29 130.6 140 51.4
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 9.5e-29 130.6 72 81.9
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.8e-27 126.3 116 61.2
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 3.0e-27 125.6 78 78.2
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 4.0e-27 125.2 92 60.9
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 6.8e-27 124.4 81 75.3
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 1.5e-26 123.2 110 59.1
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.5e-26 123.2 114 61.4
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 9.8e-26 120.6 108 53.7
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 2.9e-25 119.0 80 67.5
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 8.3e-25 117.5 71 77.5
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 1.2e-23 113.6 83 67.5
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.0e-22 110.5 63 77.8
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.9e-22 109.0 93 53.8
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.1e-20 102.8 93 57.0
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 2.7e-15 85.9 94 53.2
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 4.3e-13 78.6 104 39.4
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 9.5e-13 77.4 52 69.2
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.6e-12 76.6 43 81.4
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 7.1e-08 61.2 70 52.9
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 6.0e-07 58.2 116 40.5


User provided reference genes

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