Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G111700 Phaseolus vulgaris HOM05D005974 ORTHO05D007201 1.8e-218 762.3 392 100.0
Glyma.06G088000 Glycine max HOM05D005974 ORTHO05D007201 6.7e-205 717.2 394 91.4
Glyma.04G086500 Glycine max HOM05D005974 ORTHO05D007201 9.7e-204 713.4 393 93.9
Medtr3g110360 Medicago truncatula HOM05D005974 ORTHO05D007201 1.1e-191 673.3 400 85.8
Ca_15573_v3 Cicer arietinum L. HOM05D005974 ORTHO05D007201 1.9e-191 672.5 396 85.6
Lj1g0014442 Lotus japonicus HOM05D005974 ORTHO05D007201 4.2e-191 671.4 399 86.7
TPR.G12488 Trifolium pratense HOM05D005974 ORTHO05D007201 5.2e-189 664.5 399 83.7
Lalb_Chr08g0242951 Lupinus albus HOM05D005974 ORTHO05D007201 2.0e-188 662.5 368 89.7
arahy.Tifrunner.gnm1.ann1.CL6SAC Arachis hypogaea HOM05D005974 ORTHO05D007201 1.5e-183 646.4 408 82.1
Ciclev10010686m.g Citrus clementina HOM05D005974 ORTHO05D007201 1.2e-177 626.7 373 83.6
COL.COLO4_20996 Corchorus olitorius HOM05D005974 ORTHO05D007201 1.0e-176 623.6 363 84.3
Potri.003G158000 Populus trichocarpa HOM05D005974 ORTHO05D007201 2.3e-176 622.5 407 76.7
Oeu006965.1 Olea europaea HOM05D005974 ORTHO05D007201 3.3e-175 618.6 368 81.8
HanXRQChr17g0539061 Helianthus annuus HOM05D005974 ORTHO05D007201 5.6e-175 617.8 344 86.3
PGR044G1757 Punica granatum HOM05D005974 ORTHO05D007201 9.5e-175 617.1 344 87.2
Sabra03G0114600 Salix brachista HOM05D005974 ORTHO05D007201 1.2e-174 616.7 344 86.3
Manes.03G060100 Manihot esculenta HOM05D005974 ORTHO05D007201 1.6e-174 616.3 365 82.5
Cc08_g09880 Coffea canephora HOM05D005974 ORTHO05D007201 2.1e-174 615.9 391 78.3
MSTRG.14030 Avicennia marina HOM05D005974 ORTHO05D007201 3.6e-174 615.1 409 76.3
CsaV3_3G048470 Cucumis sativus L. HOM05D005974 ORTHO05D007201 3.6e-174 615.1 377 80.4
Dinv23389 Davidia involucrata HOM05D005974 ORTHO05D007201 3.6e-174 615.1 363 82.4
Cpa.g.sc7.214 Carica papaya HOM05D005974 ORTHO05D007201 8.0e-174 614.0 411 75.9
Gorai.010G105000 Gossypium raimondii HOM05D005974 ORTHO05D007201 1.0e-173 613.6 368 82.1
Gohir.D06G091000 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.4e-173 613.2 368 82.1
Aqoxy7G01418 Aquilegia oxysepala HOM05D005974 ORTHO05D007201 1.8e-173 612.8 343 85.7
CiPaw.08G027100 Carya illinoinensis HOM05D005974 ORTHO05D007201 1.8e-173 612.8 373 81.8
Lsat_1_v5_gn_3_25800 Lactuca sativa HOM05D005974 ORTHO05D007201 1.8e-173 612.8 344 85.5
RcHm_v2.0_Chr6g0306611 Rosa chinensis HOM05D005974 ORTHO05D007201 1.8e-173 612.8 376 79.3
Migut.E01538 Erythranthe guttata HOM05D005974 ORTHO05D007201 2.3e-173 612.5 378 79.6
TWI63G1635 Tripterygium wilfordii HOM05D005974 ORTHO05D007201 3.0e-173 612.1 363 82.1
PGR044G0481 Punica granatum HOM05D005974 ORTHO05D007201 4.0e-173 611.7 344 86.6
Eucgr.C02982 Eucalyptus grandis HOM05D005974 ORTHO05D007201 6.8e-173 610.9 403 77.2
Solyc12g095850.2 Solanum lycopersicum HOM05D005974 ORTHO05D007201 6.8e-173 610.9 343 85.7
HanXRQChr06g0174221 Helianthus annuus HOM05D005974 ORTHO05D007201 8.9e-173 610.5 346 85.3
CAN.G208.66 Capsicum annuum HOM05D005974 ORTHO05D007201 1.2e-172 610.1 404 76.2
FvH4_2g35300 Fragaria vesca HOM05D005974 ORTHO05D007201 1.2e-172 610.1 376 79.3
FAN27G3236 Fragaria x ananassa HOM05D005974 ORTHO05D007201 2.0e-172 609.4 376 79.3
Sopen12g031750 Solanum pennellii HOM05D005974 ORTHO05D007201 2.0e-172 609.4 343 85.4
FAN20G0082 Fragaria x ananassa HOM05D005974 ORTHO05D007201 5.7e-172 607.8 413 73.8
SGA_v2.0_scaffold169G38660 Striga asiatica HOM05D005974 ORTHO05D007201 5.7e-172 607.8 363 81.3
GSVIVG01035293001 Vitis vinifera HOM05D005974 ORTHO05D007201 5.7e-172 607.8 368 80.7
FAN15G0062 Fragaria x ananassa HOM05D005974 ORTHO05D007201 9.8e-172 607.1 413 74.1
Gohir.A06G091700 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.7e-171 606.3 368 81.5
MD15G1090800 Malus domestica HOM05D005974 ORTHO05D007201 2.9e-171 605.5 374 79.4
Thecc.09G047600 Theobroma cacao HOM05D005974 ORTHO05D007201 4.9e-171 604.7 408 74.8
ClCG11G015070 Citrullus lanatus HOM05D005974 ORTHO05D007201 6.4e-171 604.4 356 82.9
Nitab4.5_0001309g0090 Nicotiana tabacum HOM05D005974 ORTHO05D007201 6.4e-171 604.4 378 78.0
MELO3C003472.2 Cucumis melo HOM05D005974 ORTHO05D007201 8.3e-171 604.0 386 78.0
PSO063G5342 Papaver somniferum HOM05D005974 ORTHO05D007201 8.3e-171 604.0 344 84.0
CANSAT80G2257 Cannabis sativa HOM05D005974 ORTHO05D007201 1.1e-170 603.6 344 84.3
EL10Ac5g11988 Beta vulgaris HOM05D005974 ORTHO05D007201 1.4e-170 603.2 389 76.6
PSO832G2350 Papaver somniferum HOM05D005974 ORTHO05D007201 1.4e-170 603.2 344 84.0
ECA246G2549 Erigeron canadensis HOM05D005974 ORTHO05D007201 4.1e-170 601.7 407 74.2
Sc09g0009450 Simmondsia chinensis HOM05D005974 ORTHO05D007201 4.1e-170 601.7 380 77.9
CSS0034694 Camellia sinensis var. sinensis HOM05D005974 ORTHO05D007201 2.0e-169 599.4 400 74.8
AUR62018617 Chenopodium quinoa HOM05D005974 ORTHO05D007201 4.6e-169 598.2 342 83.3
SalBow1G5620 Salvia bowleyana HOM05D005974 ORTHO05D007201 5.9e-169 597.8 437 70.5
Os01g0743400 Oryza sativa ssp. japonica HOM05D005974 ORTHO05D007201 3.3e-167 592.0 342 84.2
THA.LOC104803747 Tarenaya hassleriana HOM05D005974 ORTHO05D007201 9.5e-167 590.5 408 75.5
Atru.chr7.2057 Acer truncatum HOM05D005974 ORTHO05D007201 4.7e-166 588.2 411 73.5
ATR0705G128 Amborella trichopoda HOM05D005974 ORTHO05D007201 4.7e-166 588.2 343 82.8
Psat5g020640 Pisum sativum HOM05D005974 ORTHO05D007201 1.8e-165 586.3 353 83.9
Actinidia30286 Actinidia chinensis HOM05D005974 ORTHO05D007201 2.2e-163 579.3 364 76.6
BcaC01g06194 Brassica carinata HOM05D005974 ORTHO05D007201 2.9e-163 578.9 341 81.5
BolC3t14221H Brassica oleracea HOM05D005974 ORTHO05D007201 2.9e-163 578.9 341 81.5
Rhsim02G0175300 Rhododendron simsii HOM05D005974 ORTHO05D007201 2.9e-163 578.9 364 76.9
A03p15570 Brassica napus HOM05D005974 ORTHO05D007201 6.4e-163 577.8 341 81.2
BcaB01g04210 Brassica carinata HOM05D005974 ORTHO05D007201 8.3e-163 577.4 341 81.2
TAR624G1429 Trochodendron aralioides HOM05D005974 ORTHO05D007201 1.1e-162 577.0 330 84.8
Sp4g05700 Schrenkiella parvula HOM05D005974 ORTHO05D007201 3.2e-162 575.5 341 80.9
C03p18200 Brassica napus HOM05D005974 ORTHO05D007201 9.2e-162 573.9 338 81.4
arahy.Tifrunner.gnm1.ann1.I5HST9 Arachis hypogaea HOM05D005974 ORTHO05D007201 3.9e-160 568.5 392 77.0
C04p55740 Brassica napus HOM05D005974 ORTHO05D007201 5.0e-160 568.2 363 76.3
A04p20060 Brassica napus HOM05D005974 ORTHO05D007201 8.6e-160 567.4 363 76.3
BraA04t17588Z Brassica rapa HOM05D005974 ORTHO05D007201 8.6e-160 567.4 363 76.3
BraA03t10849Z Brassica rapa HOM05D005974 ORTHO05D007201 1.5e-159 566.6 343 79.9
BolC4t27100H Brassica oleracea HOM05D005974 ORTHO05D007201 2.5e-159 565.8 363 76.0
CARHR115390 Cardamine hirsuta HOM05D005974 ORTHO05D007201 6.2e-158 561.2 404 69.6
Dinv27921 Davidia involucrata HOM05D005974 ORTHO05D007201 6.2e-158 561.2 363 75.8
Thhalv10002003m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 8.1e-158 560.8 398 71.9
AL4G17680 Arabidopsis lyrata HOM05D005974 ORTHO05D007201 1.1e-157 560.5 405 68.4
Carub.0004s0567 Capsella rubella HOM05D005974 ORTHO05D007201 6.8e-157 557.8 346 77.2
AT2G25840 Arabidopsis thaliana HOM05D005974 ORTHO05D007201 2.0e-156 556.2 405 68.1
Thhalv10002006m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 5.4e-154 548.1 360 74.2
QL12p041028 Quercus lobata HOM05D005974 ORTHO05D007201 4.6e-153 545.0 301 89.0
AagrBONN_evm.TU.Sc2ySwM_344.1805 Anthoceros agrestis HOM05D005974 ORTHO05D007201 6.0e-153 544.7 345 76.2
CDE02G2857 Ceratophyllum demersum HOM05D005974 ORTHO05D007201 3.0e-152 542.3 321 81.3
VMungo1309G1913 Vigna mungo HOM05D005974 ORTHO05D007201 6.6e-152 541.2 297 95.3
MBI04_g20303_MAGBIO Magnolia biondii HOM05D005974 ORTHO05D007201 1.1e-151 540.4 363 75.8
Peaxi162Scf00064g01533 Petunia axillaris HOM05D005974 ORTHO05D007201 2.5e-151 539.3 339 78.2
BcaB06g29640 Brassica carinata HOM05D005974 ORTHO05D007201 4.3e-151 538.5 363 73.6
Aa31LG5G9820 Aethionema arabicum HOM05D005974 ORTHO05D007201 2.8e-150 535.8 377 71.6
Nitab4.5_0001737g0060 Nicotiana tabacum HOM05D005974 ORTHO05D007201 1.4e-149 533.5 380 71.8
DCAR_018521 Daucus carota HOM05D005974 ORTHO05D007201 2.6e-148 529.3 298 85.2
Mapoly0137s0001 Marchantia polymorpha HOM05D005974 ORTHO05D007201 4.4e-148 528.5 345 73.0
Lj8C569G5 Lonicera japonica HOM05D000602 ORTHO05D001147 2.1e-145 519.6 390 67.9
Pp3c13_12220 Physcomitrium patens HOM05D005974 ORTHO05D007201 2.7e-145 519.2 342 71.9
HPP92_024453 Vanilla planifolia HOM05D005974 ORTHO05D007201 5.6e-143 511.5 342 73.7
Duzib187G1338 Durio zibethinus HOM05D005974 ORTHO05D007201 5.8e-140 501.5 344 75.0
AUR62007372 Chenopodium quinoa HOM05D005974 ORTHO05D007201 6.4e-139 498.0 376 67.3
Sed0012339 Sechium edule HOM05D005974 ORTHO05D007201 9.3e-138 494.2 302 81.8
SMO116G0397 Selaginella moellendorffii HOM05D005974 ORTHO05D007201 3.5e-137 492.3 342 69.9
SGA_v2.0_scaffold163G38058 Striga asiatica HOM05D005974 ORTHO05D007201 1.6e-134 483.4 344 71.2
PRCOL_00006768 Prasinoderma coloniale HOM05D005974 ORTHO05D007201 4.2e-130 468.8 346 65.9
vmacro11047 Vaccinium macrocarpon HOM05D005974 ORTHO05D007201 2.1e-129 466.5 361 66.8
MCO14G391 Micromonas commoda HOM05D005974 ORTHO05D007201 5.6e-127 458.4 353 64.3
Cre05.g238322 Chlamydomonas reinhardtii HOM05D005974 ORTHO05D007201 6.9e-125 451.4 340 62.9
Nn7g37050 Nelumbo nucifera HOM05D005974 ORTHO05D007201 4.6e-121 438.7 344 65.4
Hund14385 Selenicereus undatus HOM05D005974 ORTHO05D007201 3.0e-120 436.0 253 82.2
Prupe.1G445200 Prunus persica HOM05D005974 ORTHO05D007201 1.3e-115 420.6 255 80.8
Gohir.D06G090920 Gossypium hirsutum HOM05D005974 ORTHO05D007201 3.1e-101 372.9 212 85.4
HanXRQChr06g0174211 Helianthus annuus HOM05D005974 ORTHO05D007201 2.6e-95 353.2 205 82.0
Zm00001eb153590 Zea mays HOM05D005974 ORTHO05D007201 1.7e-91 340.5 184 89.7
BcaB06g29641 Brassica carinata HOM05D005974 ORTHO05D007201 2.8e-86 323.2 212 77.8
CBR_g26161 Chara braunii HOM05D005974 ORTHO05D007201 1.8e-80 303.9 204 70.1
Haze_27433 Corylus avellana HOM05D005974 ORTHO05D007201 4.0e-64 249.6 273 48.0
Cfa024571 Carpinus fangiana HOM05D005974 ORTHO05D007201 3.5e-52 209.9 365 36.7
Haze_21915 Corylus avellana HOM05D005974 ORTHO05D007201 1.4e-45 188.0 123 80.5
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.2e-44 184.9 213 48.8
Ah.07g201090 Amaranthus hybridus HOM05D005974 ORTHO05D007201 6.8e-40 169.1 245 41.6
SEGI_31887 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 1.9e-34 151.0 102 68.6
VMungo1309G1904 Vigna mungo HOM05D005974 ORTHO05D007201 1.2e-33 148.3 76 93.4
SEGI_40033 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 1.4e-32 144.8 85 77.6
CDE08G1286 Ceratophyllum demersum HOM05D000581 ORTHO05D000412 2.2e-30 137.5 74 87.8
Lsat_1_v5_gn_9_95260 Lactuca sativa HOM05D005974 ORTHO05D007201 3.8e-30 136.7 164 47.0
Gohir.A05G045550 Gossypium hirsutum HOM05D005974 ORTHO05D007201 6.9e-16 89.4 74 67.6
Hund30885 Selenicereus undatus HOM05D005974 ORTHO05D007201 1.7e-14 84.7 51 72.5
Hund30611 Selenicereus undatus HOM05D005974 ORTHO05D007201 3.8e-14 83.6 51 70.6
arahy.Tifrunner.gnm1.ann1.05PEK3 Arachis hypogaea HOM05D005974 ORTHO05D038942 1.4e-13 81.6 100 45.0
Gohir.D06G090940 Gossypium hirsutum HOM05D005974 ORTHO05D007201 2.4e-13 80.9 44 79.5
arahy.Tifrunner.gnm1.ann1.8YH8YH Arachis hypogaea HOM05D005974 ORTHO05D007201 5.4e-13 79.7 93 49.5
Lsat_1_v5_gn_1_66781 Lactuca sativa HOM05D000921 ORTHO05D002852 2.3e-11 74.3 107 47.7
TAR383G0536 Trochodendron aralioides HOM05D005974 ORTHO05D007201 2.4e-08 64.3 48 60.4
CBR_g26165 Chara braunii HOM05D005974 ORTHO05D007201 2.0e-07 61.2 38 78.9


User provided reference genes

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