Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 4.9e-160 567.8 290 100.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 4.3e-148 528.1 295 92.5
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.3e-141 506.5 293 89.1
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.6e-139 499.6 293 87.7
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.5e-132 475.7 293 82.6
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.8e-131 472.2 293 82.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 4.0e-130 468.4 295 81.4
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.0e-129 466.1 295 81.0
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 4.9e-128 461.5 290 81.7
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.7e-126 455.7 293 78.2
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.4e-122 442.6 293 75.8
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 3.8e-120 435.3 297 74.7
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 2.1e-118 429.5 293 74.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.6e-118 428.3 295 73.9
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.0e-118 427.9 295 73.6
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.5e-116 422.5 293 73.0
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.5e-116 422.5 293 73.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.6e-116 421.4 294 73.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 8.1e-115 417.5 293 72.4
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.1e-114 417.2 295 73.2
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 4.0e-114 415.2 295 71.2
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 6.9e-114 414.5 304 69.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 9.0e-114 414.1 295 71.9
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.5e-113 413.3 295 71.5
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.5e-113 413.3 301 70.4
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.5e-113 413.3 293 71.3
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.6e-113 412.5 293 71.7
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 4.5e-113 411.8 294 71.8
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 4.5e-113 411.8 295 72.5
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 5.8e-113 411.4 278 73.7
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.8e-113 411.4 291 69.1
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 7.6e-113 411.0 304 69.4
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.0e-112 410.6 295 71.5
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 2.2e-112 409.5 300 69.7
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.2e-112 409.5 280 74.6
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.8e-112 408.7 304 69.1
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 4.9e-112 408.3 287 71.1
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.1e-111 407.1 278 73.0
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.1e-111 407.1 275 73.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.4e-111 406.8 303 69.0
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.4e-111 406.8 275 73.8
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 4.2e-111 405.2 304 68.8
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 5.5e-111 404.8 295 71.5
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.2e-110 403.7 295 70.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.6e-110 403.3 294 71.8
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 6.0e-110 401.4 294 69.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 6.0e-110 401.4 296 68.6
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 7.9e-110 401.0 294 71.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 7.9e-110 401.0 291 69.8
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.0e-109 400.6 287 70.4
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.3e-109 399.4 288 70.5
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 3.0e-109 399.1 308 66.6
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 3.0e-109 399.1 293 70.0
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 5.1e-109 398.3 279 73.5
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 5.1e-109 398.3 281 70.1
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.1e-108 397.1 294 68.0
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.1e-108 397.1 296 70.6
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.1e-108 397.1 301 67.1
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.5e-108 396.7 289 69.6
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.6e-108 394.0 282 69.5
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 8.2e-107 391.0 283 69.3
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.1e-106 390.6 317 65.6
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.1e-106 388.7 302 66.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 6.9e-106 387.9 292 69.5
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.2e-105 387.1 278 69.8
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.2e-105 387.1 311 65.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.6e-105 386.0 300 65.7
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 7.6e-105 384.4 277 72.2
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.0e-104 384.0 278 69.1
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.3e-104 383.6 293 69.3
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 2.9e-104 382.5 292 68.5
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 3.8e-104 382.1 281 70.1
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.0e-104 381.7 292 69.2
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.1e-103 380.6 277 71.8
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 7.2e-103 377.9 292 67.8
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.6e-102 375.6 280 67.5
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.1e-102 374.8 292 67.8
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 7.9e-102 374.4 293 66.9
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.0e-101 374.0 293 67.2
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.3e-101 373.6 293 65.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.1e-101 371.7 283 67.1
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 5.1e-101 371.7 371 54.7
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 8.7e-101 370.9 293 66.2
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.1e-100 370.5 293 67.2
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.5e-100 370.2 274 70.1
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 2.5e-100 369.4 294 67.3
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 3.3e-100 369.0 293 63.8
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 5.7e-100 368.2 294 67.3
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 9.7e-100 367.5 294 67.3
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 9.7e-100 367.5 294 67.3
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.3e-99 364.8 274 68.6
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.1e-98 364.0 302 61.3
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.1e-98 364.0 281 65.5
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 7.7e-97 357.8 293 64.2
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.2e-94 350.5 299 63.9
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.6e-94 348.6 285 64.2
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.0e-93 345.9 245 71.0
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.1e-92 344.0 253 70.8
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 3.3e-92 342.4 292 63.4
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.3e-92 342.4 292 59.9
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 2.2e-91 339.7 447 46.3
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 6.3e-91 338.2 292 59.2
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.8e-85 320.1 272 62.9
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 7.4e-84 314.7 279 60.6
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 4.1e-82 308.9 258 62.8
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 5.3e-82 308.5 198 75.8
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.9e-80 302.8 204 74.0
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 9.4e-79 297.7 292 52.7
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.2e-77 292.0 209 70.8
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 4.8e-75 285.4 285 53.0
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-73 280.8 258 58.1
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.9e-73 278.5 292 53.1
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.9e-72 276.2 292 53.1
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 3.6e-70 269.2 292 49.7
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 4.0e-69 265.8 274 55.1
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 6.3e-67 258.5 273 50.5
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.6e-65 253.8 272 51.5
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.2e-63 246.1 267 48.3
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 1.6e-62 243.8 277 48.7
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.1e-62 243.4 166 71.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 8.0e-62 241.5 271 48.7
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 3.0e-61 239.6 168 72.0
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-59 233.0 252 56.0
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 4.1e-58 229.2 168 69.6
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.1e-58 229.2 270 47.4
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 6.8e-53 211.8 157 70.1
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.7e-49 199.9 284 46.8
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.3e-45 186.8 212 53.8
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 5.6e-39 165.6 138 61.6
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.4e-37 161.0 119 70.6
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 6.6e-32 142.1 133 56.4
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.9e-18 97.4 127 45.7
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.2e-18 96.3 96 54.2
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 6.9e-13 79.0 241 35.3
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 3.9e-08 63.2 186 34.9
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 7.4e-07 58.9 53 50.9


User provided reference genes

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