Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 3.0e-105 385.2 191 100.0
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 9.0e-54 214.2 340 42.6
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 3.9e-49 198.7 412 37.4
Phvul.009G103000 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 3.6e-34 149.1 83 86.7
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 8.8e-33 144.4 276 37.7
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 2.3e-25 119.8 323 31.6
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 3.7e-23 112.5 295 31.9
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.4e-22 110.5 280 32.1
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 3.1e-22 109.4 302 29.8
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 3.1e-22 109.4 277 32.5
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 9.1e-22 107.8 309 29.1
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 5.2e-17 92.0 92 56.5
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 1.0e-12 77.8 263 26.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.9e-12 76.3 103 46.6
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 6.5e-12 75.1 303 25.1
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 6.5e-12 75.1 99 46.5
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 2.5e-11 73.2 280 23.9
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 3.2e-11 72.8 100 47.0
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 7.2e-11 71.6 276 24.6
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 1.2e-10 70.9 99 46.5
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 1.6e-10 70.5 100 46.0
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 1.6e-10 70.5 97 44.3
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 4.7e-10 68.9 280 26.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 8.0e-10 68.2 294 24.1
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 8.0e-10 68.2 96 42.7
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.4e-09 67.4 276 25.0
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 4.0e-09 65.9 294 24.1
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.0e-09 65.9 96 38.5
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 6.8e-09 65.1 277 24.9
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 6.8e-09 65.1 277 24.9
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 6.8e-09 65.1 280 23.9
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 6.8e-09 65.1 280 23.9
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 8.8e-09 64.7 271 24.0
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 8.8e-09 64.7 274 25.2
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.2e-08 64.3 100 43.0
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 1.2e-08 64.3 278 23.7
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 1.5e-08 63.9 94 43.6
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 1.5e-08 63.9 285 23.9
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 2.0e-08 63.5 271 24.4
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 2.0e-08 63.5 267 24.7
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 2.6e-08 63.2 276 25.0
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 2.6e-08 63.2 94 43.6
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 2.6e-08 63.2 279 24.4
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 3.4e-08 62.8 96 40.6
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 3.4e-08 62.8 283 22.6
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 3.4e-08 62.8 99 41.4
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 3.4e-08 62.8 67 50.7
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 3.4e-08 62.8 97 40.2
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 3.4e-08 62.8 276 24.6
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 4.4e-08 62.4 70 42.9
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 4.4e-08 62.4 92 47.8
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 5.7e-08 62.0 101 44.6
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 5.7e-08 62.0 284 22.9
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 5.7e-08 62.0 92 39.1
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 7.5e-08 61.6 271 24.7
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 7.5e-08 61.6 294 23.8
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 7.5e-08 61.6 93 44.1
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 9.8e-08 61.2 268 24.6
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 9.8e-08 61.2 92 40.2
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 2.2e-07 60.1 280 24.3
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.8e-07 59.7 274 23.4
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 3.7e-07 59.3 92 38.0
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 3.7e-07 59.3 281 23.1
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 4.8e-07 58.9 70 42.9
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 6.3e-07 58.5 271 23.6
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 6.3e-07 58.5 275 23.6
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 8.3e-07 58.2 99 44.4
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 8.3e-07 58.2 126 33.3
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 1.1e-06 57.8 277 24.2
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 1.4e-06 57.4 99 41.4
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 1.4e-06 57.4 101 35.6
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 1.4e-06 57.4 92 39.1
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.8e-06 57.0 277 23.5
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 1.8e-06 57.0 92 38.0
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 2.4e-06 56.6 271 24.0
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 2.4e-06 56.6 91 38.5
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 4.1e-06 55.8 99 40.4
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 5.4e-06 55.5 71 42.3
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 7.0e-06 55.1 285 23.5
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 7.0e-06 55.1 123 33.3


User provided reference genes

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