Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 4.3e-101 371.3 188 100.0
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.9e-80 302.8 186 84.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 4.1e-75 285.0 171 86.0
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 5.3e-75 284.6 188 80.3
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.0e-73 280.4 190 77.9
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 8.5e-73 277.3 188 77.1
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 2.5e-72 275.8 188 77.1
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 3.0e-70 268.9 187 76.5
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 8.8e-70 267.3 188 77.7
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 5.7e-69 264.6 192 72.9
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 5.9e-66 254.6 188 72.9
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 7.2e-64 247.7 141 86.5
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 4.9e-60 235.0 140 82.1
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 9.2e-59 230.7 178 69.7
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.7e-57 226.5 182 68.7
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 5.0e-57 224.9 178 67.4
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 8.6e-57 224.2 181 65.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 2.5e-56 222.6 158 71.5
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 9.5e-56 220.7 151 71.5
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 9.5e-56 220.7 161 70.8
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.6e-55 219.9 127 79.5
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 2.8e-55 219.2 161 70.2
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.8e-55 219.2 161 70.2
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 3.6e-55 218.8 174 64.9
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 8.0e-55 217.6 182 62.1
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.4e-54 216.9 189 63.0
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 1.8e-54 216.5 188 64.9
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 2.3e-54 216.1 192 63.5
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 2.3e-54 216.1 140 77.1
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 5.2e-54 214.9 153 68.6
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 6.8e-54 214.5 182 62.6
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 6.8e-54 214.5 154 70.1
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.2e-53 213.8 119 83.2
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 2.0e-53 213.0 145 73.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.0e-53 213.0 151 71.5
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 2.0e-53 213.0 197 61.4
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.6e-53 212.6 190 61.1
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 4.4e-53 211.8 187 59.9
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 7.5e-53 211.1 188 61.2
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 7.5e-53 211.1 147 69.4
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 9.8e-53 210.7 125 80.0
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 9.8e-53 210.7 127 78.7
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.3e-52 210.3 143 73.4
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.3e-52 210.3 187 59.4
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.7e-52 209.9 141 70.9
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 2.9e-52 209.1 193 61.7
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.9e-52 209.1 171 64.9
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 2.9e-52 209.1 115 84.3
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 3.7e-52 208.8 136 73.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 6.4e-52 208.0 118 83.1
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 6.4e-52 208.0 142 73.2
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.1e-51 207.2 157 65.0
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.1e-51 207.2 179 62.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.4e-51 206.8 140 74.3
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.4e-51 206.8 116 81.0
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 1.4e-51 206.8 115 82.6
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.8e-51 206.5 116 81.0
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 2.4e-51 206.1 144 70.8
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 3.2e-51 205.7 183 63.4
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.2e-51 205.7 125 76.0
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 5.4e-51 204.9 187 59.4
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 5.4e-51 204.9 167 62.9
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 7.0e-51 204.5 187 58.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 7.0e-51 204.5 187 58.8
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 7.0e-51 204.5 139 69.8
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.2e-50 203.8 170 62.4
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.2e-50 203.8 155 65.2
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.2e-50 203.8 116 80.2
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.2e-50 203.8 189 59.3
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 2.7e-50 202.6 176 60.2
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 3.5e-50 202.2 130 76.2
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 4.6e-50 201.8 114 80.7
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 5.9e-50 201.4 183 61.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.9e-50 201.4 147 67.3
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 7.8e-50 201.1 142 69.7
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 7.8e-50 201.1 169 64.5
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.3e-49 200.3 189 59.8
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 2.3e-49 199.5 149 69.1
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.3e-49 199.5 188 60.1
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.3e-49 199.5 120 78.3
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 2.3e-49 199.5 167 61.7
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 2.3e-49 199.5 154 66.9
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 3.9e-49 198.7 191 57.6
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 3.9e-49 198.7 188 60.1
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 3.9e-49 198.7 195 56.9
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.0e-49 198.4 180 61.1
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 5.0e-49 198.4 118 80.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 6.6e-49 198.0 123 76.4
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 2.8e-47 192.6 158 62.7
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 4.0e-46 188.7 187 54.0
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 8.9e-46 187.6 176 58.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.2e-45 187.2 127 70.9
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 2.0e-45 186.4 118 72.9
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.8e-45 184.9 131 68.7
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 7.5e-45 184.5 157 58.0
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 8.3e-44 181.0 170 52.9
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.9e-43 179.9 157 57.3
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 5.4e-43 178.3 205 52.7
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 4.6e-42 175.3 117 68.4
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 5.0e-41 171.8 201 54.7
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 1.5e-40 170.2 140 60.7
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 4.3e-40 168.7 130 60.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 3.1e-38 162.5 149 53.7
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 5.4e-35 151.8 142 53.5
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 1.3e-33 147.1 132 56.8
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 6.6e-33 144.8 132 54.5
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 6.6e-33 144.8 128 56.2
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.2e-21 107.5 86 62.8
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 7.6e-21 104.8 135 46.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.3e-20 104.0 85 58.8
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.9e-20 102.8 97 53.6
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 6.4e-20 101.7 97 52.6
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 3.2e-19 99.4 69 68.1
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.2e-18 97.4 116 43.1
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 3.3e-16 89.4 80 55.0
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 9.3e-11 71.2 99 49.5
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 6.9e-06 55.1 60 50.0


User provided reference genes

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