Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 4.9e-216 754.2 389 100.0
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.1e-159 567.0 378 78.6
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.5e-143 513.5 379 74.9
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 2.9e-131 472.6 380 66.8
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 6.0e-129 464.9 391 65.0
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.9e-127 459.9 388 64.2
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 7.3e-127 458.0 385 64.9
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 2.5e-119 433.0 398 59.8
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.5e-100 370.5 337 62.0
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 9.6e-95 351.3 258 72.5
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 8.7e-88 328.2 392 48.5
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 9.6e-87 324.7 223 76.2
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.0e-83 314.7 406 44.1
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 5.0e-83 312.4 385 48.6
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 5.5e-74 282.3 268 56.3
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.0e-72 278.1 268 56.0
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.4e-72 277.7 268 56.0
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 3.9e-72 276.2 257 57.6
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 5.1e-72 275.8 263 57.0
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 1.5e-71 274.2 257 57.2
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 7.4e-71 271.9 257 56.8
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 5.3e-69 265.8 254 57.5
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.0e-68 263.8 250 57.2
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 2.0e-68 263.8 254 56.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.9e-67 260.0 288 51.4
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.9e-67 260.0 293 52.2
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 5.0e-67 259.2 270 53.0
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 5.0e-67 259.2 284 48.2
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.9e-66 257.3 266 53.0
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.1e-65 253.8 399 39.1
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 4.4e-63 246.1 379 40.1
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 1.3e-62 244.6 281 47.7
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 8.2e-62 241.9 247 54.7
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.1e-61 241.5 307 46.6
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.8e-61 240.7 222 57.2
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.0e-60 237.3 296 45.9
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 3.5e-60 236.5 263 49.0
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.9e-60 235.7 224 57.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.0e-59 235.0 355 40.6
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.0e-59 235.0 242 54.1
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 2.2e-59 233.8 263 48.7
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 3.8e-59 233.0 255 49.0
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 3.8e-59 233.0 262 48.9
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.5e-58 231.1 388 39.2
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.2e-58 229.9 254 50.8
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 5.5e-58 229.2 377 36.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.2e-57 228.0 255 49.4
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 8.0e-57 225.3 263 47.1
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 8.0e-57 225.3 249 51.4
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 8.8e-56 221.9 264 47.0
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 2.0e-55 220.7 249 47.8
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.6e-55 220.3 288 45.8
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 5.7e-55 219.2 263 47.1
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.5e-55 218.8 244 49.6
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-54 218.0 250 48.4
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-54 218.0 276 44.9
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.7e-54 217.6 286 46.5
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.2e-54 217.2 263 45.6
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 4.8e-54 216.1 267 47.9
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 4.8e-54 216.1 267 47.9
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 6.3e-54 215.7 297 41.4
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 8.2e-54 215.3 255 47.1
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.1e-53 214.9 304 44.4
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.1e-53 214.9 267 47.9
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.4e-53 214.5 243 50.6
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.8e-53 214.2 255 46.7
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 4.1e-53 213.0 508 31.5
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 1.2e-52 211.5 190 60.5
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 3.5e-52 209.9 247 46.2
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 3.5e-52 209.9 247 46.6
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.0e-51 208.4 194 59.3
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 1.3e-51 208.0 281 46.3
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.7e-51 207.6 358 38.3
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.7e-46 191.0 223 48.9
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.3e-46 189.1 215 49.8
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 2.4e-45 187.2 231 46.8
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.2e-44 184.9 193 51.8
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.6e-44 184.5 253 42.3
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 2.7e-44 183.7 128 75.0
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 4.5e-44 183.0 488 29.1
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.5e-42 177.2 520 27.9
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 1.2e-41 174.9 135 68.9
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 6.8e-40 169.1 273 38.1
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 8.8e-40 168.7 325 36.9
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.4e-37 160.6 202 46.5
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.4e-32 144.8 266 35.7
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.3e-30 138.3 266 37.2
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 3.7e-30 136.7 107 64.5
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 3.5e-28 130.2 148 49.3
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.8e-25 120.6 256 35.2
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.0e-23 114.4 89 64.0
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 8.3e-22 109.0 269 30.9
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 2.3e-19 100.9 268 29.5
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 1.4e-16 91.7 129 40.3
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 7.5e-15 85.9 97 49.5
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.3e-14 85.1 135 37.8
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 8.3e-14 82.4 55 78.2
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 1.2e-09 68.6 169 28.4
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.7e-06 58.2 125 28.0
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 4.9e-06 56.6 69 42.0


User provided reference genes

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