Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 2.4e-160 568.9 312 100.0
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.5e-154 548.9 312 95.8
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 5.9e-119 431.4 314 78.7
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.8e-115 419.9 312 76.0
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 7.4e-114 414.5 313 74.8
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 5.3e-112 408.3 310 75.5
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 3.6e-100 369.0 298 70.1
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 1.5e-98 363.6 243 84.4
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 9.1e-96 354.4 298 66.1
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 9.1e-96 354.4 298 67.8
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 2.0e-95 353.2 295 64.4
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 5.9e-95 351.7 298 67.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 1.7e-94 350.1 298 66.4
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 5.0e-94 348.6 300 65.3
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 1.9e-93 346.7 300 65.0
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 3.2e-93 345.9 298 64.8
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.2e-93 345.5 298 64.4
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.6e-92 343.6 295 66.4
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 1.6e-92 343.6 302 64.2
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.0e-91 340.9 298 63.8
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.8e-91 340.1 298 62.8
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.8e-91 340.1 298 63.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.8e-91 340.1 298 63.8
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 5.2e-91 338.6 302 64.6
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 8.8e-91 337.8 291 66.3
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 3.4e-90 335.9 297 64.3
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 7.5e-90 334.7 294 64.3
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 9.8e-90 334.3 298 64.1
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 6.3e-89 331.6 298 62.8
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 5.4e-88 328.6 302 63.2
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 9.1e-88 327.8 289 63.0
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 2.0e-87 326.6 295 63.1
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.0e-86 324.3 289 62.6
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 2.5e-85 319.7 282 66.0
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 5.5e-85 318.5 247 73.7
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.6e-84 317.0 271 67.2
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.6e-82 309.7 274 63.9
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 9.8e-82 307.8 293 59.7
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 1.1e-80 304.3 297 59.6
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 7.0e-80 301.6 307 58.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 9.2e-80 301.2 292 58.6
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.2e-79 300.8 301 58.1
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 5.9e-79 298.5 299 59.2
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 2.9e-78 296.2 290 58.3
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 5.6e-77 292.0 290 58.6
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 1.6e-76 290.4 297 55.9
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.4e-74 282.7 294 54.8
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 6.6e-70 268.5 209 69.9
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.5e-69 267.3 307 52.4
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 4.3e-69 265.8 296 55.7
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 3.6e-68 262.7 292 54.5
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 4.9e-65 252.3 307 51.8
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 5.0e-62 242.3 307 49.8
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 5.4e-56 222.2 297 49.8
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.1e-53 214.5 187 60.4
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 4.7e-52 209.1 217 59.0
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 6.8e-51 205.3 210 56.7
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 6.4e-33 145.6 290 34.5
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.6e-21 105.9 81 65.4
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 4.2e-16 89.7 294 27.9
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 1.0e-14 85.1 68 61.8
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 5.7e-13 79.3 277 28.9
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 2.8e-12 77.0 302 25.8
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 3.7e-12 76.6 302 25.8
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 8.2e-12 75.5 293 26.3
Lsat_1_v5_gn_2_123761 Lactuca sativa HOM05D000215 ORTHO05D008904 1.5e-10 71.2 269 26.0
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 2.0e-10 70.9 293 26.6
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 2.2e-09 67.4 269 24.2
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 1.9e-08 64.3 232 28.9
Actinidia13517 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.2e-07 61.6 290 24.5
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 1.6e-07 61.2 290 25.2
Migut.L00465 Erythranthe guttata HOM05D001865 ORTHO05D001815 3.6e-07 60.1 284 22.5
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 4.6e-07 59.7 265 26.0
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 6.1e-07 59.3 225 25.3
Glyma.02G264200 Glycine max HOM05D000215 ORTHO05D008904 6.1e-07 59.3 268 24.3
Prupe.3G159600 Prunus persica HOM05D001865 ORTHO05D001815 6.1e-07 59.3 289 24.6
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 7.9e-07 58.9 199 28.1
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 1.3e-06 58.2 199 28.1
Hma1.2p1_0809F.1_g221860 Hydrangea macrophylla HOM05D000215 ORTHO05D007108 1.3e-06 58.2 241 27.0
Rhsim09G0179200 Rhododendron simsii HOM05D000215 ORTHO05D008904 1.3e-06 58.2 284 25.0
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 1.3e-06 58.2 206 28.2
Oeu060184.1 Olea europaea HOM05D000215 ORTHO05D002239 1.8e-06 57.8 271 23.2
Sabra10G0143200 Salix brachista HOM05D000215 ORTHO05D008904 1.8e-06 57.8 299 25.8
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 3.0e-06 57.0 280 23.9
Rhsim08G0170500 Rhododendron simsii HOM05D000215 ORTHO05D003454 3.0e-06 57.0 225 24.4
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 3.9e-06 56.6 199 28.1
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 3.9e-06 56.6 231 28.1
CSS0009848 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 6.7e-06 55.8 267 23.6
Lj6P804T36 Lonicera japonica HOM05D000215 ORTHO05D003454 8.7e-06 55.5 280 23.9
PSO832G3300 Papaver somniferum HOM05D000215 ORTHO05D007108 8.7e-06 55.5 231 28.1


User provided reference genes

Program Settings