Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G089600 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 2.0e-90 335.9 188 100.0
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 6.6e-57 224.6 186 66.7
Glyma.04G063200 Glycine max HOM05D001921 ORTHO05D001784 2.1e-39 166.4 191 53.9
Glyma.06G064500 Glycine max HOM05D001921 ORTHO05D001784 2.2e-36 156.4 186 52.7
Lalb_Chr08g0244291 Lupinus albus HOM05D001921 ORTHO05D001784 3.1e-14 82.8 187 38.0
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.2e-13 80.9 192 39.1
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 7.6e-13 78.2 192 37.0
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 9.9e-13 77.8 191 36.1
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.7e-12 77.0 192 37.0
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 4.9e-12 75.5 191 37.2
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 6.4e-12 75.1 191 37.2
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.2e-11 72.8 191 36.6
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 5.4e-11 72.0 194 41.8
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.2e-10 70.9 191 36.6
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.6e-10 70.5 187 34.2
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 2.7e-10 69.7 195 35.4
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 6.0e-10 68.6 194 35.6
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 6.0e-10 68.6 204 34.3
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 3.9e-09 65.9 191 33.5
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 5.1e-09 65.5 174 33.9
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 5.1e-09 65.5 188 35.1
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 6.7e-09 65.1 180 33.9
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.5e-08 63.9 185 32.4
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 2.5e-08 63.2 185 35.1
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 3.3e-08 62.8 201 30.8
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 4.3e-08 62.4 189 32.3
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 4.3e-08 62.4 189 32.3
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 4.3e-08 62.4 157 32.5
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 7.4e-08 61.6 194 33.0
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 7.4e-08 61.6 190 34.2
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 9.6e-08 61.2 188 29.8
AT2G25250 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 1.6e-07 60.5 190 32.6
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 1.6e-07 60.5 121 35.5
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.1e-07 60.1 198 29.3
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.7e-07 59.3 181 33.7
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 3.7e-07 59.3 123 34.1
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.8e-07 58.9 187 32.1
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.8e-07 58.9 176 33.0
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 4.8e-07 58.9 153 32.7
arahy.Tifrunner.gnm1.ann1.016HCI Arachis hypogaea HOM05D054817 ORTHO05D001784 6.2e-07 58.5 185 34.1
arahy.Tifrunner.gnm1.ann1.0A2U5U Arachis hypogaea HOM05D054817 ORTHO05D001784 6.2e-07 58.5 185 34.6
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 1.1e-06 57.8 193 31.6
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.4e-06 57.4 192 32.8
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.8e-06 57.0 191 30.4
FAN27G2046 Fragaria x ananassa HOM05D014836 ORTHO05D017926 1.8e-06 57.0 184 31.5
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.8e-06 57.0 117 36.8
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.8e-06 57.0 127 37.0
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.8e-06 57.0 110 37.3
Haze_21453 Corylus avellana HOM05D001921 ORTHO05D001784 2.4e-06 56.6 171 34.5
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 2.4e-06 56.6 120 35.8
FAN20G2754 Fragaria x ananassa HOM05D014836 ORTHO05D017926 2.4e-06 56.6 184 31.5
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.4e-06 56.6 176 32.4
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.4e-06 56.6 117 36.8
PGR044G0696 Punica granatum HOM05D001921 ORTHO05D001784 2.4e-06 56.6 213 28.2
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 2.4e-06 56.6 186 31.2
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 3.1e-06 56.2 165 32.7
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 3.1e-06 56.2 208 29.8
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 5.3e-06 55.5 174 32.2
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.3e-06 55.5 174 32.2
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 5.3e-06 55.5 198 32.3
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 6.9e-06 55.1 190 31.1
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 6.9e-06 55.1 143 32.2
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 6.9e-06 55.1 199 31.7
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 9.0e-06 54.7 120 39.2
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 9.0e-06 54.7 120 35.0


User provided reference genes

Program Settings