Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 8.1e-129 463.8 238 100.0
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 7.9e-100 367.5 218 88.1
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 5.7e-90 334.7 216 80.1
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 6.3e-89 331.3 216 79.6
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 5.9e-71 271.6 219 68.0
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.0e-67 260.8 216 63.0
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 8.9e-67 257.7 218 62.4
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 7.5e-66 254.6 218 62.4
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.1e-64 250.8 219 64.8
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 8.0e-60 234.6 222 60.4
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 6.8e-59 231.5 214 60.3
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 8.9e-59 231.1 220 60.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.2e-58 230.7 219 61.6
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 7.5e-58 228.0 220 60.0
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 4.9e-57 225.3 216 56.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 8.3e-57 224.6 219 57.5
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 2.4e-56 223.0 217 55.8
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.4e-56 223.0 218 58.7
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 3.2e-56 222.6 220 56.4
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 4.1e-56 222.2 186 62.9
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 4.1e-56 222.2 221 58.4
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 9.2e-56 221.1 191 61.8
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 4.6e-55 218.8 224 57.6
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 6.0e-55 218.4 224 57.6
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 4.3e-53 212.2 219 55.7
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.2e-52 210.7 222 53.2
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.2e-52 210.7 223 54.3
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 2.8e-52 209.5 222 54.5
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 2.8e-52 209.5 219 53.4
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.6e-52 209.1 222 55.0
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 8.0e-52 208.0 217 53.0
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 5.2e-51 205.3 227 55.9
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 5.2e-51 205.3 219 53.0
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 6.8e-51 204.9 218 56.0
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 2.0e-50 203.4 216 54.2
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 3.4e-50 202.6 183 59.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.3e-49 200.7 203 54.2
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 2.2e-49 199.9 185 55.7
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 3.7e-49 199.1 203 54.2
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 3.7e-49 199.1 220 50.9
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 4.9e-49 198.7 217 53.5
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.4e-48 197.2 199 52.8
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 1.9e-48 196.8 201 53.2
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 1.9e-48 196.8 203 53.7
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 1.9e-48 196.8 203 53.7
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 1.9e-48 196.8 203 53.7
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.9e-48 196.8 147 66.7
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 1.9e-48 196.8 224 50.9
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 2.4e-48 196.4 187 57.2
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 3.2e-48 196.1 159 60.4
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.1e-48 195.7 238 48.7
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.6e-47 193.7 234 50.4
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 2.1e-47 193.4 217 50.2
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.7e-47 193.0 242 47.9
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 2.7e-47 193.0 193 54.9
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 3.5e-47 192.6 172 58.7
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 3.5e-47 192.6 180 56.7
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 3.5e-47 192.6 190 54.2
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 4.6e-47 192.2 215 51.2
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 4.6e-47 192.2 225 48.9
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.7e-46 190.3 215 48.8
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.7e-46 190.3 191 58.1
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.7e-46 190.3 216 51.9
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 6.6e-46 188.3 230 54.3
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 6.6e-46 188.3 199 51.3
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 8.6e-46 188.0 207 50.2
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.9e-45 186.8 198 51.0
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.3e-45 186.0 204 51.0
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 3.3e-45 186.0 221 46.6
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 4.3e-45 185.7 219 49.8
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 4.0e-43 179.1 217 48.8
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 4.0e-43 179.1 197 50.8
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 8.9e-43 177.9 194 53.6
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 2.6e-42 176.4 145 60.7
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.7e-41 172.6 157 52.9
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 4.9e-41 172.2 216 47.7
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 8.3e-41 171.4 128 66.4
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 7.1e-40 168.3 137 62.0
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 7.1e-40 168.3 231 44.6
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 7.8e-39 164.9 294 35.7
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 5.1e-38 162.2 170 54.1
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 6.6e-38 161.8 170 53.5
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 3.3e-37 159.5 149 58.4
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 4.3e-37 159.1 170 53.5
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.2e-36 157.5 160 53.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 2.8e-36 156.4 155 56.8
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 2.8e-36 156.4 236 41.5
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 6.8e-35 151.8 148 54.7
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 4.4e-34 149.1 148 52.0
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.2e-31 141.0 204 43.1
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.5e-31 139.4 236 39.4
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 5.1e-30 135.6 234 40.2
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 1.1e-24 117.9 215 35.8
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 9.6e-21 104.8 221 35.7
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 4.0e-19 99.4 97 52.6
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.5e-18 97.4 222 36.5
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 3.8e-17 92.8 148 42.6
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 1.3e-14 84.3 178 32.0
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 7.6e-10 68.6 68 52.9
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 3.9e-06 56.2 102 37.3


User provided reference genes

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