Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 5.1e-148 527.7 265 100.0
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 3.3e-139 498.4 265 93.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 4.7e-125 451.4 270 84.8
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 9.7e-123 443.7 265 79.2
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 9.4e-118 427.2 266 80.8
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 2.7e-117 425.6 266 80.5
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 2.6e-115 419.1 262 76.3
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.7e-114 416.4 261 77.8
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 5.9e-112 407.9 258 77.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.0e-111 407.1 262 74.0
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 5.2e-108 394.8 264 70.8
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.4e-105 386.0 262 71.8
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.4e-100 370.2 265 67.2
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 6.8e-100 367.9 257 68.5
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.2e-99 367.1 255 68.2
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 4.4e-99 365.2 263 66.9
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.2e-98 362.8 260 68.1
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 2.2e-98 362.8 265 66.4
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 3.7e-98 362.1 262 65.6
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 6.3e-98 361.3 263 66.9
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 7.7e-96 354.4 287 61.7
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 2.9e-95 352.4 265 64.9
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 5.0e-95 351.7 265 65.7
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.6e-95 351.3 265 64.5
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 6.6e-95 351.3 263 66.5
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 8.6e-95 350.9 267 64.8
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.1e-94 350.5 265 64.5
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.5e-94 350.1 249 66.7
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 4.2e-94 348.6 266 66.5
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 7.2e-94 347.8 265 63.8
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 7.2e-94 347.8 263 65.0
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 4.7e-93 345.1 265 63.0
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 6.1e-93 344.7 249 67.1
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 6.1e-93 344.7 263 64.6
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 8.0e-93 344.4 248 66.1
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 2.3e-92 342.8 263 63.5
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.3e-92 342.8 267 62.5
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 8.9e-92 340.9 243 68.3
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.0e-91 339.7 262 64.9
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.4e-91 339.0 259 64.9
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.3e-90 337.0 262 64.1
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.7e-90 336.7 265 63.4
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.7e-90 335.5 262 63.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 4.9e-90 335.1 244 65.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 4.9e-90 335.1 244 65.6
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 4.9e-90 335.1 247 66.4
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 6.3e-90 334.7 265 63.0
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 6.3e-90 334.7 289 58.8
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 8.3e-90 334.3 244 66.0
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.4e-89 333.6 250 68.4
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.8e-89 333.2 244 65.2
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.8e-89 333.2 244 65.2
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.8e-89 333.2 265 63.4
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 2.4e-89 332.8 245 64.5
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 4.1e-89 332.0 265 61.1
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 9.2e-89 330.9 250 67.6
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 9.2e-89 330.9 251 64.5
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.6e-88 330.1 244 65.6
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 2.0e-88 329.7 248 65.3
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.5e-88 328.9 250 67.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.5e-88 328.6 250 67.6
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.8e-88 327.8 250 67.2
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 7.8e-88 327.8 258 62.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.0e-87 327.4 267 61.8
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-87 327.0 262 62.2
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.7e-87 326.6 250 66.8
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.3e-87 326.2 244 63.9
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 5.0e-87 325.1 236 63.6
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 5.0e-87 325.1 242 62.4
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 6.6e-87 324.7 244 63.1
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 8.6e-87 324.3 261 59.4
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.5e-86 323.6 248 64.1
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.5e-86 323.6 229 65.9
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.5e-86 323.6 254 63.8
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 9.5e-86 320.9 265 58.9
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.1e-85 319.7 271 61.6
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.6e-85 318.9 240 64.2
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.4e-84 317.0 255 62.0
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 1.4e-84 317.0 255 62.0
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 2.3e-84 316.2 265 58.1
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.0e-84 315.5 264 59.5
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 6.8e-84 314.7 272 59.6
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 2.0e-83 313.2 247 61.9
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 4.4e-83 312.0 233 64.8
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.2e-82 309.7 265 59.6
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 2.9e-82 309.3 250 64.0
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 3.2e-81 305.8 251 60.2
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 4.1e-81 305.4 254 59.8
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 7.0e-81 304.7 241 60.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 7.8e-80 301.2 237 62.4
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 9.5e-78 294.3 252 56.7
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.1e-76 290.8 289 52.9
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.2e-75 287.3 258 55.4
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.4e-75 285.8 224 62.9
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 5.8e-75 285.0 280 51.4
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.9e-74 282.7 235 60.0
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 3.2e-73 279.3 262 54.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 5.4e-73 278.5 243 56.8
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 3.0e-71 272.7 231 58.4
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 8.6e-71 271.2 231 58.9
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 2.5e-70 269.6 274 51.1
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.2e-69 267.3 249 55.0
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 6.8e-68 261.5 172 72.7
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 5.8e-67 258.5 265 50.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.7e-63 246.9 254 51.2
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 3.0e-63 246.1 217 56.7
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.4e-60 237.3 172 65.7
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.3e-58 230.7 196 58.7
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.2e-58 229.9 172 65.7
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.3e-55 220.7 245 46.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.0e-55 219.5 152 69.7
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 5.6e-54 215.3 172 59.3
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.3e-53 214.2 172 59.3
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 5.8e-51 205.3 129 76.7
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 5.4e-49 198.7 245 45.7
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.3e-45 187.6 155 60.0
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.4e-44 183.3 141 66.7
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.6e-43 179.9 218 42.7
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.3e-42 177.6 147 61.2
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.3e-42 177.6 111 79.3
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 3.8e-42 176.0 119 68.1
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.4e-42 174.9 147 61.2
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 8.4e-42 174.9 128 65.6
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.5e-38 163.3 193 46.1
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 8.4e-34 148.3 93 74.2
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 9.3e-33 144.8 109 62.4
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.6e-27 126.7 83 69.9
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.8e-27 125.6 91 68.1
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 3.2e-25 119.8 147 44.9
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.6e-24 117.5 89 66.3
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 6.1e-24 115.5 92 62.0
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 6.1e-24 115.5 92 62.0
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 5.9e-19 99.0 76 60.5
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.9e-17 94.0 262 30.2
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.7e-13 80.9 236 29.7
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.2e-09 65.5 80 46.2
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.2e-09 65.5 80 46.2
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.1e-08 63.9 80 46.2


User provided reference genes

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