Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G072700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 6.2e-81 304.3 180 100.0
Glyma.06G047300 Glycine max HOM05D002412 ORTHO05D002516 3.6e-60 235.3 185 83.2
Glyma.04G046600 Glycine max HOM05D002412 ORTHO05D002516 7.9e-60 234.2 186 67.7
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 3.2e-45 185.7 175 58.9
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 4.0e-43 178.7 183 57.4
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 8.8e-43 177.6 181 55.8
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 4.5e-39 165.2 183 53.6
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 2.9e-38 162.5 184 53.3
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 3.2e-37 159.1 185 54.6
Lj1g0008942 Lotus japonicus HOM05D002412 ORTHO05D002516 2.2e-33 146.4 164 67.1
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 2.7e-31 139.4 189 48.7
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 7.7e-31 137.9 188 52.7
Lalb_Chr22g0355701 Lupinus albus HOM05D002412 ORTHO05D002516 7.2e-29 131.3 184 50.0
Medtr1g017890 Medicago truncatula HOM05D002412 ORTHO05D002516 4.4e-26 122.1 154 47.4
VMungo0795G0001 Vigna mungo HOM05D002412 ORTHO05D002516 2.8e-25 119.4 127 77.2
Medtr3g103260 Medicago truncatula HOM05D002412 ORTHO05D002516 2.4e-24 116.3 154 61.0
arahy.Tifrunner.gnm1.ann1.QB6IYV Arachis hypogaea HOM05D002412 ORTHO05D002516 2.5e-21 106.3 195 44.1
Psat6g017720 Pisum sativum HOM05D002412 ORTHO05D002516 5.6e-21 105.1 162 45.1
arahy.Tifrunner.gnm1.ann1.3RQF03 Arachis hypogaea HOM05D002412 ORTHO05D002516 1.4e-19 100.5 194 47.4
TPR.G13172 Trifolium pratense HOM05D002412 ORTHO05D002516 2.3e-19 99.8 154 43.5
VMungo1309G0934 Vigna mungo HOM05D001114 ORTHO05D000940 5.2e-19 98.6 76 69.7
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 1.2e-15 87.4 179 38.5
CiPaw.07G173700 Carya illinoinensis HOM05D002412 ORTHO05D002516 5.9e-15 85.1 186 37.1
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 7.8e-15 84.7 186 36.0
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 2.3e-14 83.2 185 36.2
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 2.3e-14 83.2 187 35.3
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 3.0e-14 82.8 168 38.1
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 3.0e-14 82.8 185 35.7
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 5.0e-14 82.0 191 36.1
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 1.5e-13 80.5 179 41.9
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.5e-13 79.7 184 36.4
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.3e-13 79.0 178 35.4
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 9.5e-13 77.8 178 34.8
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 2.1e-12 76.6 183 35.0
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 2.1e-12 76.6 184 36.4
Dinv39215 Davidia involucrata HOM05D002412 ORTHO05D002516 2.8e-12 76.3 185 38.4
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.8e-12 76.3 177 36.7
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.4e-11 73.9 174 35.6
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 4.0e-11 72.4 186 34.4
Ca_13210_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 8.9e-11 71.2 123 41.5
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 8.9e-11 71.2 182 33.5
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.2e-10 70.9 185 30.8
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 4.4e-10 68.9 179 40.2
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 5.8e-10 68.6 181 41.4
GSVIVG01009322001 Vitis vinifera HOM05D002412 ORTHO05D002516 9.8e-10 67.8 91 48.4
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 1.7e-09 67.0 152 34.9
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.7e-09 65.9 184 34.8
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.9e-09 65.5 184 35.3
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 8.3e-09 64.7 184 35.3
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.4e-08 63.9 178 33.7
FAN15G1641 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.2e-08 62.8 189 40.7
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 4.1e-08 62.4 176 31.8
FvH4_2g03590 Fragaria vesca HOM05D002412 ORTHO05D002516 7.0e-08 61.6 179 44.7
FAN24G3376 Fragaria x ananassa HOM05D002412 ORTHO05D002516 7.0e-08 61.6 179 45.8
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 7.0e-08 61.6 183 35.5
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 1.2e-07 60.8 172 33.7
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.0e-07 60.1 171 33.9
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 2.7e-07 59.7 129 36.4
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 3.5e-07 59.3 120 38.3
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 4.6e-07 58.9 163 36.2
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 4.6e-07 58.9 174 30.5
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 6.0e-07 58.5 165 33.3
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 6.0e-07 58.5 176 34.1
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 6.0e-07 58.5 169 31.4
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.0e-06 57.8 171 31.6
FAN20G0615 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.0e-06 57.8 180 41.1
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 1.0e-06 57.8 184 33.2
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 1.3e-06 57.4 167 31.1
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.7e-06 57.0 184 32.6
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.3e-06 56.6 188 33.0
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 2.3e-06 56.6 168 32.7
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.9e-06 55.8 125 35.2
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 3.9e-06 55.8 191 28.8
MBI16_g37755_MAGBIO Magnolia biondii HOM05D002412 ORTHO05D002516 5.0e-06 55.5 90 36.7
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 5.0e-06 55.5 183 31.7
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 6.6e-06 55.1 193 31.1


User provided reference genes

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