Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.7e-106 389.4 206 100.0
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 7.4e-94 347.4 210 89.0
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 3.7e-85 318.5 207 82.6
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.1e-81 307.0 209 81.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.0e-67 259.6 204 63.7
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.9e-65 253.1 206 61.7
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.0e-63 247.3 213 59.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.4e-63 246.9 206 60.2
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.3e-63 246.1 207 61.4
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 5.9e-59 231.5 203 64.0
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 7.7e-59 231.1 205 58.5
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.7e-58 229.9 205 65.4
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 3.2e-57 225.7 208 65.4
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 3.6e-56 222.2 209 64.6
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 7.4e-54 214.5 206 53.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.2e-53 213.0 200 54.0
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 7.7e-51 204.5 205 52.7
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.5e-49 200.3 205 51.2
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.5e-49 200.3 205 51.2
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 9.4e-49 197.6 202 51.0
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.6e-48 196.8 207 50.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 4.7e-48 195.3 198 58.1
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 6.1e-48 194.9 210 50.5
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.3e-47 193.0 201 49.8
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.6e-46 189.5 213 48.4
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 1.1e-44 184.1 196 55.6
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 1.8e-44 183.3 201 50.7
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 1.6e-43 180.3 206 49.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.0e-43 179.9 198 48.5
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.0e-43 179.9 198 48.5
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 2.7e-43 179.5 202 47.5
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 2.7e-43 179.5 208 54.3
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 7.7e-43 177.9 205 44.4
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.7e-42 176.8 212 48.6
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.9e-42 176.0 205 44.4
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.0e-42 175.3 214 45.3
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 6.5e-42 174.9 199 47.2
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 8.5e-42 174.5 214 45.3
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 8.5e-42 174.5 214 45.3
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.1e-41 174.1 200 48.0
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 2.5e-41 172.9 195 46.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.5e-41 172.9 202 53.5
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 3.2e-41 172.6 198 53.0
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 4.2e-41 172.2 199 45.7
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 4.2e-41 172.2 199 46.2
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.5e-41 171.8 205 42.9
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 7.2e-41 171.4 194 46.9
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.2e-40 170.6 225 49.8
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.6e-40 170.2 195 45.1
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 3.6e-40 169.1 213 51.2
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 3.6e-40 169.1 195 52.8
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.0e-39 165.6 212 46.2
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.5e-38 163.7 198 44.4
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.4e-38 162.5 193 43.0
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 4.4e-38 162.2 215 43.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 9.8e-38 161.0 216 43.5
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.8e-38 161.0 212 45.3
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 9.8e-38 161.0 201 52.2
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 2.8e-37 159.5 197 44.2
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.4e-36 157.1 199 40.7
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 9.1e-36 154.5 212 42.0
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.7e-35 152.9 194 44.3
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.5e-35 152.5 212 43.9
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.5e-35 152.5 198 41.9
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.3e-34 149.8 207 45.9
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 6.5e-34 148.3 200 41.0
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.5e-33 147.1 210 42.4
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 5.5e-33 145.2 201 49.3
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.6e-32 143.7 197 40.6
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.6e-32 142.5 196 44.9
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 4.7e-32 142.1 158 48.7
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 2.3e-31 139.8 220 38.2
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 2.3e-31 139.8 200 43.0
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 4.0e-31 139.0 228 39.9
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 5.2e-31 138.7 192 45.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.2e-30 137.5 208 39.9
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.0e-30 136.7 196 44.9
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 7.5e-30 134.8 214 44.9
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 2.2e-29 133.3 190 44.2
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 1.4e-28 130.6 218 46.8
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 1.4e-28 130.6 218 46.8
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 1.4e-28 130.6 206 43.2
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.8e-28 130.2 218 37.2
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.1e-28 129.4 227 36.6
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 3.1e-28 129.4 206 39.8
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 5.9e-27 125.2 145 46.2
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 6.6e-26 121.7 208 44.2
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.9e-25 120.2 221 38.0
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 4.7e-24 115.5 194 35.6
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.6e-22 109.8 205 35.1
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.4e-22 109.4 211 37.4
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.4e-22 109.0 205 36.1
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.9e-21 106.3 167 39.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.7e-21 105.9 182 37.9
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 8.3e-21 104.8 222 38.7
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.4e-20 104.0 188 37.2
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.6e-19 100.5 192 37.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.0e-19 100.1 205 33.2
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 2.7e-19 99.8 203 36.0
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 5.0e-18 95.5 207 31.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 6.6e-18 95.1 129 39.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.5e-17 94.0 196 35.7
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.5e-17 94.0 194 32.5
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.5e-17 93.2 205 33.7
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.5e-17 93.2 192 32.8
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.5e-17 93.2 192 32.8
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.6e-17 92.0 161 37.3
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 5.6e-17 92.0 91 48.4
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.1e-16 90.1 169 34.9
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 3.6e-16 89.4 196 33.7
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 4.7e-16 89.0 196 33.7
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.1e-15 87.8 173 34.1
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.6e-14 83.2 220 30.5
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 4.9e-13 79.0 198 34.8
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.9e-12 77.0 112 40.2
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 7.8e-11 71.6 238 28.6
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.0e-10 71.2 134 34.3
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 8.6e-10 68.2 191 27.7
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.1e-07 61.2 181 28.7
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 2.3e-07 60.1 129 34.1
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 4.0e-07 59.3 90 51.1
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.2e-06 57.8 181 28.2


User provided reference genes

Program Settings