Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 2.9e-52 208.4 111 100.0
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 1.4e-43 179.5 111 86.5
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 3.9e-33 144.8 111 72.1
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 8.7e-33 143.7 111 72.1
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 5.8e-21 104.4 114 57.0
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 1.3e-17 93.2 115 48.7
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 1.5e-16 89.7 114 53.5
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 6.3e-15 84.3 122 43.4
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 2.6e-13 79.0 94 47.9
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 1.7e-12 76.3 70 55.7
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 8.5e-12 73.9 99 47.5
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 2.5e-11 72.4 74 54.1
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 4.2e-11 71.6 81 46.9
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 1.2e-10 70.1 100 46.0
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 1.0e-09 67.0 81 43.2
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 1.0e-09 67.0 117 39.3
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 1.4e-09 66.6 105 42.9
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.8e-09 66.2 90 47.8
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 2.3e-09 65.9 109 43.1
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 3.0e-09 65.5 67 50.7
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 3.0e-09 65.5 86 44.2
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 5.1e-09 64.7 124 41.9
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 6.7e-09 64.3 109 41.3
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 6.7e-09 64.3 117 37.6
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 8.8e-09 63.9 64 50.0
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 8.8e-09 63.9 68 48.5
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 1.1e-08 63.5 109 41.3
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.5e-08 63.2 116 40.5
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 1.5e-08 63.2 116 40.5
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.5e-08 63.2 118 37.3
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 1.5e-08 63.2 106 45.3
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 1.5e-08 63.2 106 39.6
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.9e-08 62.8 99 40.4
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.9e-08 62.8 99 40.4
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 3.3e-08 62.0 109 38.5
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 3.3e-08 62.0 69 46.4
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 5.7e-08 61.2 109 37.6
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 9.7e-08 60.5 67 44.8
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 9.7e-08 60.5 109 40.4
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.3e-07 60.1 68 50.0
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 1.7e-07 59.7 70 47.1
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 2.8e-07 58.9 115 36.5
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 2.8e-07 58.9 67 41.8
MELO3C010908.2 Cucumis melo HOM05D022138 ORTHO05D010078 6.3e-07 57.8 104 39.4
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 6.3e-07 57.8 84 39.3
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 8.2e-07 57.4 69 44.9
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 2.4e-06 55.8 97 39.2
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.1e-06 55.1 79 43.0
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 5.3e-06 54.7 109 37.6
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 5.3e-06 54.7 70 48.6
ClCG08G015480 Citrullus lanatus HOM05D022138 ORTHO05D010078 9.1e-06 53.9 104 41.3
Sed0013073 Sechium edule HOM05D022138 ORTHO05D010078 9.1e-06 53.9 86 41.9


User provided reference genes

Program Settings