Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 9.7e-195 683.3 354 100.0
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 2.8e-165 585.5 354 88.1
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 6.0e-136 488.0 362 78.2
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 5.1e-119 431.8 359 73.0
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 1.0e-50 204.9 258 51.6
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 8.6e-50 201.8 239 54.0
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 1.9e-44 184.1 214 50.9
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 3.2e-44 183.3 213 55.9
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 4.1e-44 183.0 250 46.4
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 3.4e-38 163.3 256 43.8
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 2.4e-36 157.1 328 40.2
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 4.7e-32 142.9 410 35.4
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 4.7e-32 142.9 253 41.5
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 7.5e-30 135.6 184 43.5
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 1.3e-29 134.8 250 41.2
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 2.2e-29 134.0 188 39.9
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 6.4e-29 132.5 251 39.4
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 9.2e-28 128.6 185 37.3
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 1.2e-27 128.3 245 36.7
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 1.2e-27 128.3 185 42.2
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.2e-27 128.3 393 33.1
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 1.3e-26 124.8 189 38.6
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 2.3e-26 124.0 409 32.3
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 6.6e-26 122.5 266 33.5
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 3.3e-25 120.2 193 38.3
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 3.6e-24 116.7 260 36.2
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 2.4e-23 114.0 351 31.1
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 3.1e-23 113.6 410 30.0
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 5.2e-23 112.8 360 31.4
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 2.0e-22 110.9 227 31.7
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 2.6e-22 110.5 404 31.9
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 3.4e-22 110.2 257 32.7
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 3.4e-22 110.2 403 31.0
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 3.4e-22 110.2 304 31.9
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 5.8e-22 109.4 266 31.2
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 7.6e-22 109.0 382 31.4
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 7.6e-22 109.0 403 29.0
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 2.2e-21 107.5 238 35.7
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 3.8e-21 106.7 373 29.0
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.8e-21 106.7 266 30.5
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 8.4e-21 105.5 117 46.2
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 2.4e-20 104.0 271 32.5
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 5.4e-20 102.8 367 30.5
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 7.1e-20 102.4 322 31.1
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 9.2e-20 102.1 205 37.1
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.2e-19 101.7 375 28.5
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 1.2e-19 101.7 181 35.4
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 1.2e-19 101.7 390 28.7
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 1.2e-19 101.7 390 28.7
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 2.1e-19 100.9 300 31.7
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 3.5e-19 100.1 243 35.0
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 4.6e-19 99.8 181 35.4
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.7e-18 97.8 372 31.2
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 1.7e-18 97.8 374 28.1
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.3e-18 97.4 181 35.4
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 2.3e-18 97.4 373 28.4
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 3.0e-18 97.1 325 29.2
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.9e-18 96.7 410 28.3
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 5.1e-18 96.3 235 32.3
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.1e-17 95.1 374 29.4
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 1.9e-17 94.4 171 35.1
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 1.9e-17 94.4 163 32.5
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 2.5e-17 94.0 171 35.1
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.3e-17 93.6 365 29.6
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.6e-17 92.8 201 32.8
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 7.3e-17 92.4 380 28.9
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 7.3e-17 92.4 201 32.3
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 9.6e-17 92.0 174 33.9
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 9.6e-17 92.0 294 28.2
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 2.1e-16 90.9 179 35.2
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.6e-16 90.1 226 35.0
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 3.6e-16 90.1 183 39.9
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 6.2e-16 89.4 231 31.2
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 1.1e-15 88.6 222 33.8
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.8e-15 87.8 400 27.8
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.8e-15 87.8 366 27.6
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 1.8e-15 87.8 362 28.5
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.4e-15 87.4 269 32.3
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 2.4e-15 87.4 304 30.6
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 6.9e-15 85.9 375 30.4
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 1.5e-14 84.7 234 29.5
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 2.0e-14 84.3 245 28.2
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 2.0e-14 84.3 273 27.8
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 2.6e-14 84.0 222 31.1
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 2.6e-14 84.0 266 30.1
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 7.6e-14 82.4 368 29.6
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 7.6e-14 82.4 376 27.7
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 9.9e-14 82.0 268 30.6
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.3e-13 81.6 260 32.7
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 1.7e-13 81.3 442 28.3
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 1.7e-13 81.3 379 27.4
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 2.2e-13 80.9 166 37.3
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 6.4e-13 79.3 314 30.6
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 1.4e-12 78.2 233 33.0
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 2.4e-12 77.4 342 31.0
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 5.4e-12 76.3 401 26.7
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 3.5e-11 73.6 357 27.2
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 4.6e-11 73.2 376 23.9
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 6.0e-11 72.8 191 30.9
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 6.0e-11 72.8 378 29.1
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 7.8e-11 72.4 372 27.4
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 3.0e-10 70.5 413 25.9
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 1.5e-09 68.2 226 32.3
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.5e-09 67.4 344 27.0
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.3e-09 67.0 189 29.1
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 7.3e-09 65.9 364 28.6
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 1.4e-07 61.6 152 34.2
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 3.1e-07 60.5 145 33.1
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 5.3e-07 59.7 300 28.0
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 5.3e-07 59.7 178 30.9
MELO3C016357.2 Cucumis melo HOM05D005336 ORTHO05D006511 2.6e-06 57.4 76 43.4
ClCG07G008170 Citrullus lanatus HOM05D005336 ORTHO05D006511 4.5e-06 56.6 76 43.4
CsaV3_4G005910 Cucumis sativus L. HOM05D005336 ORTHO05D006511 5.8e-06 56.2 76 42.1
Prupe.5G135700 Prunus persica HOM05D005336 ORTHO05D006511 7.6e-06 55.8 87 39.1
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 9.9e-06 55.5 339 25.4
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 9.9e-06 55.5 291 28.9
Sc12g0010690 Simmondsia chinensis HOM05D005336 ORTHO05D006511 9.9e-06 55.5 76 43.4


User provided reference genes

Program Settings