Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 4.0e-117 424.9 227 100.0
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 7.3e-103 377.5 227 90.3
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 2.9e-91 339.0 229 81.2
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 1.9e-87 326.2 225 76.9
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 4.5e-84 315.1 225 74.2
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.2e-81 307.0 226 73.5
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.8e-80 303.1 227 73.6
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 8.1e-78 294.3 227 71.8
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.0e-72 277.3 189 75.7
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 4.1e-69 265.4 228 63.6
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.5e-68 263.5 228 63.2
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.1e-66 257.3 197 68.5
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.6e-65 253.4 191 66.5
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.6e-65 253.4 213 62.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.3e-64 250.4 237 58.6
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 6.7e-64 248.1 223 58.3
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.3e-62 243.8 234 57.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.2e-62 243.0 224 57.6
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 3.1e-61 239.2 195 62.6
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 5.3e-61 238.4 222 56.8
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.5e-60 236.9 228 55.3
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 5.9e-60 235.0 192 64.1
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 1.0e-59 234.2 191 61.8
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.0e-59 234.2 189 63.5
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 3.8e-59 232.3 213 57.3
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 5.0e-59 231.9 234 55.6
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 5.0e-59 231.9 229 55.0
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 5.0e-59 231.9 220 58.2
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.5e-58 229.6 230 54.3
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 3.2e-58 229.2 227 55.1
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 4.2e-58 228.8 230 57.4
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 9.4e-58 227.6 190 57.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 1.6e-57 226.9 200 59.0
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.1e-57 226.5 243 53.5
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 3.6e-57 225.7 215 55.3
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.6e-57 225.7 216 57.4
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 6.1e-57 224.9 216 55.6
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 6.1e-57 224.9 190 58.9
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 6.1e-57 224.9 238 52.9
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.0e-56 224.2 184 63.0
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.0e-56 224.2 233 54.9
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.8e-56 223.4 188 59.6
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 2.3e-56 223.0 226 52.2
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 3.9e-56 222.2 189 57.7
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 5.1e-56 221.9 233 54.9
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.1e-55 220.7 196 56.6
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.5e-55 220.3 213 57.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 1.5e-55 220.3 180 61.1
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 4.3e-55 218.8 224 51.8
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 4.3e-55 218.8 224 51.3
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 5.7e-55 218.4 205 55.6
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 2.2e-54 216.5 229 54.1
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 2.2e-54 216.5 184 58.2
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 2.8e-54 216.1 234 52.6
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 4.8e-54 215.3 217 53.0
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 6.3e-54 214.9 184 57.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 8.2e-54 214.5 179 64.2
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.1e-53 214.2 125 86.4
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.1e-53 214.2 184 57.1
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.8e-53 213.4 190 57.4
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 3.1e-53 212.6 228 51.8
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 3.4e-52 209.1 203 54.7
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.4e-52 209.1 203 54.7
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 7.7e-52 208.0 212 55.7
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.3e-51 207.2 214 51.9
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.3e-51 207.2 203 53.7
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.9e-51 206.1 210 51.4
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 5.0e-51 205.3 222 51.8
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 6.5e-51 204.9 203 53.7
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.1e-50 204.1 184 57.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.4e-50 203.8 218 54.6
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.4e-50 203.8 161 59.0
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.2e-49 200.7 203 53.2
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.1e-49 199.9 170 55.3
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 4.7e-49 198.7 200 51.5
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 7.9e-49 198.0 202 51.0
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.1e-47 194.1 234 45.3
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 4.4e-47 192.2 199 55.3
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 9.7e-47 191.0 161 59.6
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.4e-45 187.2 177 56.5
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 7.0e-45 184.9 165 61.2
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.5e-44 182.2 253 43.5
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 3.2e-42 176.0 224 47.8
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.6e-41 172.6 170 52.4
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 6.1e-41 171.8 170 51.8
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 8.8e-40 167.9 210 45.7
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 7.5e-39 164.9 225 46.7
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.1e-37 161.0 186 45.2
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 4.1e-37 159.1 212 46.7
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 2.0e-36 156.8 171 46.8
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.6e-36 156.4 157 55.4
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.7e-35 153.7 129 58.9
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.8e-32 143.7 186 43.0
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 6.8e-32 141.7 168 43.5
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.4e-31 139.4 173 48.0
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 9.1e-29 131.3 133 52.6
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 3.5e-28 129.4 206 38.3
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 2.9e-27 126.3 100 62.0
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.8e-24 115.2 89 61.8
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 2.2e-22 110.2 82 62.2
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.5e-18 97.4 71 62.0
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 1.9e-18 97.1 133 43.6
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 4.7e-17 92.4 219 34.2
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 4.7e-17 92.4 107 46.7
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 4.3e-10 69.3 89 40.4
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 8.3e-06 55.1 45 53.3
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 8.3e-06 55.1 105 38.1


User provided reference genes

Program Settings