Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 0.0e+00 1308.9 722 100.0
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 2.1e-273 945.7 759 75.5
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 4.4e-234 815.1 736 67.1
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 5.3e-232 808.1 741 67.2
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 4.4e-186 655.6 741 55.9
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 3.2e-184 649.4 745 56.2
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 7.8e-183 644.8 745 56.5
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.4e-176 624.0 784 55.1
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 5.8e-170 602.1 760 53.3
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.8e-164 582.4 764 54.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 6.7e-142 508.8 778 48.7
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 5.9e-138 495.7 758 47.2
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 1.7e-137 494.2 765 48.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 8.2e-132 475.3 803 48.8
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 3.1e-131 473.4 729 46.4
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 2.2e-124 450.7 753 45.6
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.1e-123 448.4 764 43.7
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 1.2e-119 434.9 658 46.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.0e-118 431.8 758 43.5
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 7.4e-117 425.6 754 43.4
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 1.3e-116 424.9 779 41.5
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 2.8e-116 423.7 735 42.4
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 8.2e-116 422.2 803 41.7
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.8e-115 421.0 799 41.4
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 5.9e-114 416.0 762 41.2
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 2.2e-113 414.1 579 48.2
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.9e-112 411.0 743 42.5
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.0e-110 405.2 767 41.7
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 9.8e-109 398.7 572 46.7
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.7e-108 397.9 708 41.7
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 3.7e-108 396.7 767 39.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.6e-106 391.3 577 44.5
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.6e-106 391.3 816 39.3
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.3e-105 388.3 754 40.5
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.2e-105 387.5 580 45.0
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 8.5e-105 385.6 595 45.4
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.6e-103 380.2 685 40.6
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 2.3e-102 377.5 720 41.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.2e-101 375.2 778 40.6
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.6e-101 374.0 755 42.3
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.3e-100 371.7 804 38.6
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.8e-100 370.5 753 42.0
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 8.3e-100 369.0 639 41.8
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.1e-99 368.6 757 41.1
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.9e-97 360.5 622 42.4
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.6e-95 353.6 795 37.9
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.4e-94 351.7 789 40.9
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.3e-94 350.9 608 41.4
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 6.8e-94 349.4 762 38.5
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 6.8e-94 349.4 752 38.2
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 6.8e-94 349.4 776 38.3
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.0e-93 347.8 770 42.1
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 5.7e-93 346.3 568 44.0
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 5.7e-93 346.3 582 43.3
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 2.2e-92 344.4 717 39.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 3.7e-92 343.6 715 39.4
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.4e-91 340.9 719 40.5
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.7e-89 334.7 659 41.3
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 5.2e-86 323.2 822 35.5
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 2.6e-85 320.9 766 36.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 2.2e-84 317.8 778 37.8
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 8.3e-84 315.8 747 36.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.4e-83 315.1 788 37.1
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 3.2e-83 313.9 514 41.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 2.0e-82 311.2 582 43.0
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 2.3e-81 307.8 593 41.0
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 3.9e-81 307.0 746 35.9
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 5.6e-80 303.1 607 40.2
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 6.8e-78 296.2 599 38.6
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.5e-77 295.0 581 39.1
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 6.4e-76 289.7 601 40.3
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 7.1e-75 286.2 726 36.4
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.6e-74 283.5 570 40.2
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 2.3e-73 281.2 574 41.6
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 3.3e-72 277.3 604 38.7
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.6e-71 273.9 766 35.5
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 8.9e-70 269.2 789 34.9
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.2e-69 268.9 678 36.9
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.6e-69 267.7 291 54.3
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.6e-69 266.2 543 37.4
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.6e-69 266.2 543 37.4
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 2.3e-65 254.6 573 38.7
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.2e-63 248.8 573 38.7
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 7.6e-61 239.6 581 37.5
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 2.9e-60 237.7 789 33.5
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 6.4e-60 236.5 800 32.4
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 8.4e-60 236.1 695 34.4
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 4.2e-59 233.8 584 38.0
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 4.2e-59 233.8 584 38.0
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 5.4e-59 233.4 813 32.6
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.0e-57 229.2 653 35.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 1.3e-57 228.8 656 33.8
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 9.6e-56 222.6 576 36.6
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 2.8e-55 221.1 579 36.6
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 8.1e-55 219.5 659 35.8
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.4e-54 218.8 775 29.7
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.8e-54 218.4 673 31.4
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.5e-53 215.3 593 36.6
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.7e-52 211.8 567 33.2
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 2.2e-52 211.5 774 29.5
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 8.4e-52 209.5 512 37.9
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.7e-49 201.8 429 38.5
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 5.3e-46 190.3 677 31.6
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 6.4e-44 183.3 324 43.8
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 7.1e-43 179.9 518 35.7
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 2.5e-32 144.8 580 30.3
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.7e-31 141.0 496 31.5
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.6e-26 125.6 503 30.8
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 9.7e-24 116.3 197 41.6
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.5e-21 107.5 592 27.7
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.5e-21 107.5 592 27.7
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 2.9e-20 104.8 398 31.9
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 4.3e-16 90.9 179 40.8
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.2e-12 78.6 148 37.8
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 3.9e-09 67.8 157 44.6
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 7.4e-08 63.5 45 66.7


User provided reference genes

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