Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 1.5e-17 91.7 43 100.0
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.8e-17 89.7 43 97.7
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.8e-17 89.7 43 97.7
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.8e-17 89.7 43 97.7
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.8e-17 89.7 43 97.7
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.8e-17 89.7 43 97.7
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 8.3e-16 85.9 40 97.5
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 8.3e-16 85.9 40 97.5
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.3e-16 85.9 40 97.5
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 8.3e-16 85.9 43 93.0
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 1.1e-15 85.5 40 95.0
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 7.1e-15 82.8 40 95.0
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 7.1e-15 82.8 41 92.7
arahy.Tifrunner.gnm1.ann1.60YYL0 Arachis hypogaea HOM05D010190 ORTHO05D009823 5.1e-13 76.6 39 89.7
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 1.9e-12 74.7 39 89.7
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.5e-12 74.3 35 97.1
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.5e-12 74.3 35 97.1
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.5e-12 74.3 35 97.1
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.5e-12 74.3 35 97.1
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 3.1e-10 67.4 43 76.7
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.0e-09 64.7 31 93.5
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.0e-09 64.7 31 93.5
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 7.6e-09 62.8 31 93.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.3e-08 62.0 37 83.8
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.3e-08 62.0 37 83.8
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 4.9e-08 60.1 37 73.0
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 1.9e-07 58.2 37 75.7
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 1.9e-07 58.2 38 71.1
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 1.9e-07 58.2 29 93.1
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 3.2e-07 57.4 31 87.1
Medtr3g028290 Medicago truncatula HOM05D007952 ORTHO05D009823 3.2e-07 57.4 30 86.7
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 3.2e-07 57.4 37 78.4
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.4e-07 56.6 28 92.9
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 1.2e-06 55.5 27 96.3
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 2.1e-06 54.7 40 65.0
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.7e-06 54.3 26 96.2
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 3.5e-06 53.9 27 92.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.5e-06 53.9 27 92.6
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 6.0e-06 53.1 27 92.6
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 6.0e-06 53.1 26 92.3


User provided reference genes

Program Settings