Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 1.3e-92 343.2 189 100.0
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 5.9e-82 307.8 189 91.0
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 4.0e-78 295.0 190 82.6
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.2e-77 293.5 189 81.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 1.9e-59 233.0 192 68.2
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.3e-57 226.9 193 65.8
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.6e-55 219.9 195 66.7
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 4.7e-55 218.4 195 65.1
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.2e-53 213.8 197 60.4
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 9.9e-53 210.7 192 59.9
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.2e-52 209.5 189 60.8
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 4.1e-51 205.3 183 63.9
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-50 203.4 188 59.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 4.6e-50 201.8 173 60.7
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 6.0e-50 201.4 179 60.9
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 7.8e-50 201.1 183 59.6
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 7.8e-50 201.1 188 61.7
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.0e-49 199.1 188 61.2
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.9e-49 198.7 181 60.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 5.1e-49 198.4 190 61.1
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 1.5e-48 196.8 182 59.9
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 3.3e-48 195.7 182 57.7
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 5.6e-48 194.9 171 57.9
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 7.3e-48 194.5 170 58.2
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 7.3e-48 194.5 180 63.9
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 9.5e-48 194.1 177 55.4
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.2e-47 193.7 172 58.7
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.2e-47 193.7 170 57.6
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.6e-47 193.4 164 59.8
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.1e-47 193.0 191 57.6
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 2.8e-47 192.6 178 57.3
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 3.6e-47 192.2 173 60.1
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.7e-47 191.8 177 61.0
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.7e-47 191.8 177 61.0
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 6.2e-47 191.4 189 57.1
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.4e-46 190.3 180 58.3
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.4e-46 190.3 186 58.1
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.4e-46 190.3 163 60.7
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.4e-46 189.5 170 58.2
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 3.1e-46 189.1 165 60.0
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.0e-46 188.7 165 58.2
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 5.2e-46 188.3 206 54.4
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 6.8e-46 188.0 183 56.3
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 6.8e-46 188.0 189 55.0
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.2e-45 187.2 183 62.8
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.6e-45 186.0 185 58.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 2.6e-45 186.0 173 62.4
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.6e-45 186.0 189 57.1
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 2.6e-45 186.0 138 72.5
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 5.8e-45 184.9 179 63.7
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 7.6e-45 184.5 174 56.9
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 9.9e-45 184.1 189 59.8
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 9.9e-45 184.1 191 57.1
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.3e-44 183.7 168 58.9
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.3e-44 183.7 199 54.3
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.7e-44 183.3 199 58.3
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.9e-44 182.6 195 56.4
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.8e-44 182.2 181 56.4
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 1.1e-43 180.6 194 56.7
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 1.4e-43 180.3 188 59.0
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.9e-43 179.9 201 55.2
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.9e-43 179.9 196 57.7
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.9e-43 179.9 183 54.1
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.4e-43 179.5 180 54.4
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 3.2e-43 179.1 192 55.2
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 3.2e-43 179.1 192 55.2
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 4.2e-43 178.7 160 59.4
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 4.2e-43 178.7 191 57.1
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 5.4e-43 178.3 146 61.0
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 7.1e-43 177.9 189 54.5
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.2e-42 177.2 180 57.2
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.1e-40 170.6 129 66.7
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 2.5e-40 169.5 155 54.8
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.5e-40 169.5 199 55.8
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 2.5e-40 169.5 125 64.8
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 5.6e-40 168.3 116 72.4
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 7.3e-40 167.9 191 53.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.2e-39 167.2 170 52.9
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.2e-39 167.2 169 55.6
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 2.8e-39 166.0 121 66.9
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.6e-39 165.6 176 54.5
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 3.6e-39 165.6 187 55.1
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 4.7e-39 165.2 183 50.3
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 8.1e-39 164.5 178 51.7
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.1e-38 164.1 152 59.9
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.4e-36 154.8 176 50.6
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 6.4e-36 154.8 173 46.8
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 8.4e-36 154.5 144 56.9
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 4.2e-35 152.1 117 73.5
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.2e-34 150.6 92 76.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.6e-34 150.2 161 54.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.3e-33 147.1 196 52.6
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.7e-33 146.7 157 56.7
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 3.9e-33 145.6 89 74.2
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.9e-32 143.3 132 55.3
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.3e-31 140.6 89 74.2
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 9.9e-29 131.0 134 47.8
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 4.6e-26 122.1 150 54.0
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.1e-25 118.6 145 49.7
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 8.7e-25 117.9 128 46.1
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.5e-24 116.3 188 45.2
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 4.3e-24 115.5 154 55.2
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.8e-23 112.8 135 51.9
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.5e-16 90.5 181 33.1
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.6e-15 87.0 137 41.6
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 2.8e-15 86.3 114 41.2
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 9.0e-14 81.3 108 41.7


User provided reference genes

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