Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.9e-113 412.5 209 100.0
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 4.1e-84 315.1 213 78.9
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 3.6e-80 302.0 214 76.6
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 4.4e-70 268.5 187 75.4
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.9e-52 209.9 224 57.1
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.5e-46 190.3 219 56.2
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.6e-46 189.5 220 54.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.7e-45 186.8 218 55.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.0e-42 177.6 213 52.1
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.4e-39 166.4 214 50.9
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.4e-39 166.4 217 49.8
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 3.1e-39 166.0 229 50.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.0e-39 164.5 218 48.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.2e-38 164.1 223 51.1
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 2.2e-37 159.8 214 47.2
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.4e-37 158.3 218 42.2
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 1.4e-36 157.1 207 50.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 7.8e-35 151.4 212 48.1
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.3e-34 150.6 210 48.1
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.0e-34 149.4 203 50.2
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 3.9e-34 149.1 208 47.1
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 3.9e-34 149.1 209 45.9
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 8.7e-34 147.9 204 46.1
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 8.7e-34 147.9 204 46.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.5e-33 146.4 213 46.9
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 4.3e-33 145.6 196 51.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.6e-33 145.2 198 48.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.6e-33 144.4 211 46.9
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.3e-32 144.1 213 46.5
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.3e-32 144.1 208 45.7
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.1e-32 143.3 209 47.8
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.8e-32 142.9 214 47.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-30 137.5 203 43.8
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 3.4e-30 136.0 214 45.8
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 4.9e-29 132.1 200 45.0
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 4.9e-29 132.1 189 47.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 4.9e-29 132.1 207 44.9
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.4e-29 131.3 189 47.1
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.1e-28 131.0 196 46.9
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.9e-28 130.2 203 45.8
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.9e-28 130.2 265 40.8
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.2e-28 129.4 196 40.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 3.2e-28 129.4 195 46.7
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.2e-28 129.0 200 44.0
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 7.1e-28 128.3 228 41.7
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.1e-28 128.3 195 46.7
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.2e-27 127.5 195 46.2
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 2.1e-27 126.7 196 40.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 2.1e-27 126.7 219 44.7
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.5e-27 125.9 196 40.3
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 3.5e-27 125.9 188 44.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 6.0e-27 125.2 187 40.6
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.3e-26 124.0 219 40.6
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.8e-26 123.6 187 43.9
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.3e-26 123.2 201 46.8
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 3.0e-26 122.9 224 40.2
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 3.9e-26 122.5 211 38.9
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 5.1e-26 122.1 188 42.6
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 7.4e-25 118.2 195 39.5
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.3e-24 117.5 205 41.5
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.1e-23 114.4 168 44.0
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.4e-23 113.2 219 40.2
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.4e-23 113.2 206 39.8
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.1e-23 112.8 196 37.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.1e-23 112.8 196 37.8
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 5.3e-23 112.1 229 40.6
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.2e-22 110.9 190 37.4
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.6e-22 109.8 217 41.5
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.3e-21 107.5 229 36.7
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.9e-21 106.3 153 41.2
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 4.9e-21 105.5 211 36.5
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 6.5e-21 105.1 182 38.5
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 8.4e-21 104.8 202 36.6
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.4e-20 104.0 217 41.5
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.4e-20 104.0 211 38.9
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.9e-20 103.6 217 40.1
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 2.5e-20 103.2 222 36.5
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 5.5e-20 102.1 214 36.9
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.5e-20 102.1 203 40.4
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 7.1e-20 101.7 203 39.4
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 9.3e-20 101.3 222 36.0
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.7e-19 99.8 224 33.0
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.5e-19 99.4 168 38.7
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.1e-17 94.4 217 36.4
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-17 94.4 189 37.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-17 93.2 184 34.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-17 93.2 184 34.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.5e-17 93.2 194 37.1
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.3e-17 92.4 207 35.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 7.4e-17 91.7 210 34.3
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 9.6e-17 91.3 187 34.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 6.2e-16 88.6 209 32.1
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 4.0e-15 85.9 208 33.2
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 2.9e-13 79.7 234 32.9
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.4e-12 77.4 249 29.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.2e-11 74.3 165 35.2
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 6.1e-11 72.0 190 30.5
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 6.1e-11 72.0 190 30.5
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 7.9e-11 71.6 204 30.9
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.5e-09 67.4 192 37.0
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.5e-09 66.6 126 35.7
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 9.7e-09 64.7 214 31.8
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.2e-08 63.5 189 32.8
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.8e-08 63.2 156 34.6
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 1.1e-07 61.2 154 33.1
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 4.1e-07 59.3 186 31.2
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 5.3e-07 58.9 182 29.7
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 5.9e-06 55.5 72 40.3


User provided reference genes

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