Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 9.1e-168 593.6 318 100.0
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.8e-158 561.6 318 92.5
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 4.7e-148 528.1 319 87.8
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 8.0e-148 527.3 333 85.3
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 6.0e-135 484.6 318 83.3
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 2.0e-130 469.5 320 76.2
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 7.5e-130 467.6 321 72.9
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 7.8e-127 457.6 321 76.3
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.1e-125 453.8 321 77.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 3.4e-122 442.2 329 73.9
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 7.8e-119 431.0 334 73.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.3e-118 430.3 325 72.0
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.1e-117 427.2 322 73.9
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.6e-114 416.0 318 65.7
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 3.4e-114 415.6 318 71.4
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.7e-113 413.3 319 70.5
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.9e-112 409.8 331 68.3
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 5.6e-109 398.3 322 70.2
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.1e-108 396.4 332 67.5
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.7e-108 395.2 317 65.3
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 4.7e-108 395.2 317 65.3
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.1e-107 394.0 319 61.8
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 3.1e-107 392.5 326 68.4
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 3.1e-107 392.5 318 68.6
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.2e-107 391.7 318 65.1
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 5.2e-107 391.7 319 69.6
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.2e-106 390.6 343 65.3
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 4.4e-106 388.7 295 70.8
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.9e-105 385.2 350 64.0
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.2e-104 382.5 356 62.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 4.2e-104 382.1 357 62.5
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.6e-103 378.6 351 63.0
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 1.0e-102 377.5 320 66.9
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.7e-102 376.7 318 65.1
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 2.3e-102 376.3 345 62.6
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.3e-102 376.3 339 62.2
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 7.3e-101 371.3 363 61.4
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 7.3e-101 371.3 319 58.9
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 3.6e-100 369.0 347 59.7
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.4e-99 366.3 330 61.2
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 5.3e-99 365.2 326 64.4
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 2.0e-98 363.2 314 65.3
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 2.6e-98 362.8 318 60.7
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 4.5e-98 362.1 324 61.7
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.3e-97 360.5 319 59.9
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.7e-97 360.1 383 54.8
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.4e-96 357.1 318 56.0
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 1.9e-96 356.7 318 54.1
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 3.2e-96 355.9 324 60.5
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 2.1e-95 353.2 319 53.6
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 2.7e-95 352.8 314 62.1
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.3e-94 349.7 316 60.8
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.1e-93 347.4 320 64.1
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 1.5e-93 347.1 327 56.9
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 7.4e-93 344.7 310 60.0
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 2.1e-92 343.2 322 62.1
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 6.9e-91 338.2 346 59.0
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 9.9e-90 334.3 330 58.8
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.7e-89 333.6 319 57.7
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 4.9e-89 332.0 330 56.4
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 5.5e-88 328.6 313 57.5
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 9.3e-88 327.8 264 65.5
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 9.3e-88 327.8 320 55.6
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.6e-87 327.0 317 57.4
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.6e-87 327.0 319 59.2
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 5.1e-86 322.0 320 59.4
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 8.2e-84 314.7 352 55.7
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 2.2e-81 306.6 334 53.3
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 4.9e-81 305.4 312 50.6
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 6.0e-79 298.5 351 51.0
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.0e-78 297.7 319 54.5
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.9e-78 295.8 304 55.9
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 6.7e-78 295.0 316 50.9
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 6.7e-78 295.0 320 52.8
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 8.7e-78 294.7 316 53.5
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 4.3e-77 292.4 337 53.4
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 5.7e-77 292.0 324 52.5
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 7.4e-77 291.6 337 53.4
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 1.6e-76 290.4 337 53.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-76 290.4 317 47.3
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 2.2e-76 290.0 338 50.0
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.8e-76 288.9 317 47.6
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.1e-75 287.7 324 51.9
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 5.3e-75 285.4 345 51.3
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 5.3e-75 285.4 345 51.3
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 5.3e-75 285.4 345 51.3
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 6.9e-75 285.0 324 51.5
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 6.9e-75 285.0 345 51.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.2e-74 284.3 345 51.3
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.2e-74 284.3 345 51.0
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 1.2e-74 284.3 345 51.0
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.6e-74 283.1 317 47.3
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 1.0e-73 281.2 351 52.1
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.0e-73 281.2 336 54.5
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.2e-73 280.0 377 48.0
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 3.8e-73 279.3 341 49.6
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 3.2e-72 276.2 325 53.2
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 7.2e-72 275.0 314 53.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 7.9e-71 271.6 359 48.7
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 3.0e-70 269.6 388 46.4
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.0e-70 269.6 317 46.4
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 4.3e-69 265.8 323 48.3
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.7e-65 253.8 266 56.8
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 3.8e-65 252.7 309 49.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.1e-64 251.1 297 46.5
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 6.3e-60 235.3 308 42.9
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.2e-55 221.1 324 40.4
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 8.0e-55 218.4 320 42.8
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 3.9e-54 216.1 326 43.3
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.0e-49 201.4 201 60.7
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 2.9e-49 199.9 129 72.1
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 2.5e-48 196.8 352 41.5
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.0e-46 191.4 130 70.8
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.6e-45 186.8 231 44.2
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.3e-44 184.5 393 32.6
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.2e-44 183.7 320 35.6
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.4e-43 180.3 326 40.2
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.2e-41 173.7 153 60.8
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.3e-33 147.9 152 47.4
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.0e-30 138.3 317 35.3
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.7e-28 131.0 312 29.8
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.0e-25 121.7 300 29.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.3e-25 121.3 315 28.9
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.6e-23 114.4 143 42.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.8e-22 110.9 323 27.9
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.9e-20 103.6 113 45.1
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.9e-19 100.9 221 43.0
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 8.0e-15 85.5 163 39.3
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 1.7e-09 67.8 48 62.5
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.5e-08 63.9 93 38.7
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 2.8e-07 60.5 150 30.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 6.2e-07 59.3 90 36.7
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 6.8e-06 55.8 107 33.6


User provided reference genes

Program Settings