Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G021966 Phaseolus vulgaris HOM05D000445 ORTHO05D000314 1.1e-39 166.0 74 100.0
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 9.9e-33 142.9 66 95.5
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.3e-31 136.3 66 90.9
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.7e-30 134.8 66 90.9
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 6.0e-30 133.7 66 89.4
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 6.0e-30 133.7 66 89.4
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.7e-29 132.1 66 89.4
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.7e-29 132.1 66 89.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 1.7e-29 132.1 66 89.4
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 1.7e-29 132.1 66 89.4
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 1.7e-29 132.1 66 89.4
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 5.1e-29 130.6 66 89.4
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 5.1e-29 130.6 66 87.9
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 5.1e-29 130.6 66 87.9
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 6.6e-29 130.2 66 87.9
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 1.1e-28 129.4 66 87.9
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 1.1e-28 129.4 66 87.9
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.1e-28 129.4 66 87.9
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 1.9e-28 128.6 66 86.4
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 1.9e-28 128.6 66 84.8
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 2.5e-28 128.3 66 86.4
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.5e-28 128.3 66 86.4
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.5e-28 128.3 66 86.4
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-28 127.9 66 87.9
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-28 127.9 66 87.9
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-28 127.9 66 87.9
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 5.6e-28 127.1 69 85.5
Gohir.A12G048150 Gossypium hirsutum HOM05D000445 ORTHO05D000314 7.3e-28 126.7 66 84.8
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 9.6e-28 126.3 66 84.8
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 1.6e-27 125.6 65 87.7
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 1.6e-27 125.6 65 87.7
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-27 125.2 66 84.8
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-27 125.2 66 84.8
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-27 125.2 66 84.8
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-27 125.2 66 84.8
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.1e-27 125.2 66 84.8
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 2.8e-27 124.8 66 86.4
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 2.8e-27 124.8 66 86.4
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 2.8e-27 124.8 66 86.4
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 4.8e-27 124.0 66 86.4
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 4.8e-27 124.0 66 86.4
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 8.1e-27 123.2 66 84.8
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 1.8e-26 122.1 66 81.8
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 3.1e-26 121.3 66 80.3
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 4.0e-26 120.9 66 83.3
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 4.0e-26 120.9 66 83.3
BolSC37t60781H Brassica oleracea HOM05D000445 ORTHO05D000314 5.3e-26 120.6 66 80.3
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 6.9e-26 120.2 67 83.6
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 6.9e-26 120.2 67 83.6
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 68 83.8
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.0e-26 119.8 66 83.3
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.2e-25 119.4 63 85.7
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.5e-25 119.0 66 83.3
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.5e-25 119.0 66 83.3
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 1.5e-25 119.0 66 81.8
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.5e-25 119.0 66 81.8
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 2.6e-25 118.2 66 81.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 5.8e-25 117.1 68 79.4
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 5.8e-25 117.1 68 79.4
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 5.8e-25 117.1 68 79.4
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 2.9e-24 114.8 61 85.2
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-23 112.8 66 80.3
Gorai.009G069400 Gossypium raimondii HOM05D000445 ORTHO05D000314 3.2e-23 111.3 66 77.3
Nitab4.5_0002616g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.2e-23 110.9 64 78.1
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.0e-22 107.1 66 74.2
Oeu062827.1 Olea europaea HOM05D000445 ORTHO05D000314 2.3e-21 105.1 66 74.2
HanXRQChr11g0333811 Helianthus annuus HOM05D000445 ORTHO05D000314 3.9e-21 104.4 58 82.8
Lalb_Chr25g0281941 Lupinus albus HOM05D000445 ORTHO05D000314 3.9e-21 104.4 66 72.7
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 5.1e-21 104.0 65 75.4
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 1.5e-20 102.4 53 84.9
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 2.5e-20 101.7 66 75.8
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 4.3e-20 100.9 69 69.6
Oeu022561.1 Olea europaea HOM05D000445 ORTHO05D000314 7.3e-20 100.1 66 71.2
Oeu062847.1 Olea europaea HOM05D000445 ORTHO05D000314 1.3e-19 99.4 67 71.6
Nitab4.5_0001761g0270 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.8e-19 97.4 66 69.7
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.1e-18 96.3 54 81.5
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 1.5e-17 92.4 42 95.2
BolSC29t60491H Brassica oleracea HOM05D000445 ORTHO05D000314 3.4e-17 91.3 50 80.0
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 5.8e-17 90.5 66 65.2
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 9.9e-17 89.7 54 75.9
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 2.9e-16 88.2 50 80.0
Nitab4.5_0014666g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.9e-16 88.2 52 78.8
Nitab4.5_0004376g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.4e-15 85.9 54 72.2
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.5e-12 75.1 40 85.0
Nitab4.5_0022403g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.5e-12 75.1 42 81.0
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 2.4e-10 68.6 33 84.8
Nitab4.5_0003415g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.3e-10 67.4 43 72.1
Lalb_Chr20g0115671 Lupinus albus HOM05D000445 ORTHO05D000314 6.9e-10 67.0 42 71.4
Medtr2g019700 Medicago truncatula HOM05D000445 ORTHO05D000314 5.8e-09 63.9 38 73.7
Medtr3g450940 Medicago truncatula HOM05D000445 ORTHO05D000314 5.8e-09 63.9 52 65.4
Medtr5g010700 Medicago truncatula HOM05D000445 ORTHO05D000314 5.8e-09 63.9 38 73.7
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 1.7e-08 62.4 52 63.5
Medtr8g024820 Medicago truncatula HOM05D000445 ORTHO05D000314 1.7e-08 62.4 52 63.5
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.5 38 76.3
Nitab4.5_0027450g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.9e-07 58.9 38 71.1
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 2.5e-07 58.5 28 85.7
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.3e-07 56.6 29 86.2
GSVIVG01011431001 Vitis vinifera HOM05D000445 ORTHO05D000314 9.3e-07 56.6 45 62.2
Gohir.D10G110850 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.5e-06 54.7 28 82.1
MD15G1364300 Malus domestica HOM05D000445 ORTHO05D000314 4.6e-06 54.3 29 82.8


User provided reference genes

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