Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 5.2e-128 462.2 519 100.0
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 9.2e-109 398.3 521 88.3
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 4.1e-93 346.3 279 88.5
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 1.9e-85 320.9 510 87.6
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 9.2e-77 292.0 286 74.1
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 1.8e-72 277.7 190 70.0
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 5.8e-71 272.7 284 70.8
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 1.9e-69 267.7 286 65.0
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 4.3e-66 256.5 283 63.3
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 3.1e-56 223.8 247 70.0
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 2.9e-54 217.2 188 60.1
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 4.9e-54 216.5 276 67.0
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 2.1e-52 211.1 186 58.1
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 1.0e-51 208.8 186 56.5
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 1.3e-49 201.8 159 61.6
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 1.2e-47 195.3 168 58.3
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 1.1e-45 188.7 163 56.4
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 2.5e-45 187.6 179 54.2
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 7.1e-45 186.0 163 55.8
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 5.1e-43 179.9 174 50.6
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 8.7e-43 179.1 172 51.7
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 1.5e-42 178.3 183 48.1
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 1.3e-41 175.3 185 47.6
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 3.7e-41 173.7 175 49.7
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 4.8e-41 173.3 176 44.9
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 6.3e-41 172.9 187 45.5
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 6.3e-41 172.9 186 46.8
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 1.1e-40 172.2 186 45.7
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 1.4e-40 171.8 183 45.4
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 1.8e-40 171.4 176 47.2
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 2.4e-40 171.0 186 45.7
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 2.6e-39 167.5 170 50.6
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 1.0e-38 165.6 187 43.9
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 1.7e-38 164.9 155 54.8
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 1.7e-38 164.9 174 48.9
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 2.2e-38 164.5 160 52.5
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.9e-38 164.1 191 47.1
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.9e-38 164.1 191 47.1
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 3.8e-38 163.7 176 47.2
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 6.5e-38 162.9 189 44.4
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 5.5e-37 159.8 194 44.8
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 1.6e-36 158.3 155 50.3
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 1.1e-34 152.1 190 44.2
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 1.1e-34 152.1 186 38.2
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 3.3e-34 150.6 180 43.3
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 9.7e-34 149.1 179 43.0
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 2.8e-33 147.5 169 44.4
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 8.2e-33 146.0 191 41.9
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 1.1e-32 145.6 193 48.7
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.4e-32 145.2 190 42.1
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.4e-32 145.2 191 42.9
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 6.9e-32 142.9 187 46.5
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 1.5e-31 141.7 187 45.5
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 1.5e-31 141.7 186 44.6
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 2.6e-31 141.0 188 46.3
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 5.0e-30 136.7 178 44.4
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 5.0e-30 136.7 177 44.6
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 5.0e-30 136.7 178 44.4
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 5.0e-30 136.7 178 44.4
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 5.0e-30 136.7 110 57.3
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 6.5e-30 136.3 182 43.4
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 6.5e-30 136.3 178 43.8
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 8.5e-30 136.0 115 52.2
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 1.1e-29 135.6 189 40.7
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 1.9e-29 134.8 110 56.4
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 3.2e-29 134.0 182 44.0
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 3.2e-29 134.0 182 44.0
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 3.2e-29 134.0 146 45.2
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 6.1e-28 129.8 176 42.6
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 7.9e-28 129.4 173 42.8
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 1.0e-27 129.0 176 44.3
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 2.3e-27 127.9 176 42.6
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 5.1e-27 126.7 190 40.0
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 5.1e-27 126.7 190 40.0
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 6.7e-27 126.3 175 39.4
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 8.8e-27 125.9 187 38.0
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 1.1e-26 125.6 190 38.4
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 1.5e-26 125.2 185 41.1
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 1.5e-26 125.2 190 39.5
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 4.4e-26 123.6 168 42.3
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 4.4e-26 123.6 181 37.6
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 5.7e-26 123.2 113 50.4
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 5.7e-26 123.2 98 58.2
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 7.4e-26 122.9 189 38.1
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 7.4e-26 122.9 190 37.4
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 1.3e-25 122.1 110 52.7
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 1.3e-25 122.1 202 39.6
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 2.2e-25 121.3 140 45.0
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 3.7e-25 120.6 105 52.4
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 6.3e-25 119.8 186 39.2
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 6.3e-25 119.8 194 37.6
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 2.4e-24 117.9 185 37.8
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 3.1e-24 117.5 104 51.9
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 5.3e-24 116.7 110 49.1
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 5.3e-24 116.7 197 36.0
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 5.3e-24 116.7 197 36.0
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 6.9e-24 116.3 188 36.7
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 1.5e-23 115.2 190 38.4
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 2.6e-23 114.4 104 51.0
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 1.3e-22 112.1 103 48.5
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 1.3e-22 112.1 107 47.7
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 2.9e-22 110.9 92 54.3
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 6.5e-22 109.8 104 46.2
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 3.2e-21 107.5 148 41.2
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 1.6e-20 105.1 191 34.0
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 1.6e-20 105.1 182 36.3
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 1.4e-19 102.1 190 33.7
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 1.8e-19 101.7 190 33.7
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 2.3e-19 101.3 190 33.7
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 2.0e-18 98.2 119 40.3
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 3.3e-18 97.4 191 34.0
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 1.7e-17 95.1 191 33.5
Gohir.D13G196370 Gossypium hirsutum HOM05D006080 ORTHO05D007382 8.2e-17 92.8 103 41.7
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 2.4e-16 91.3 184 31.5
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 4.5e-15 87.0 165 34.5
Eucgr.C00814 Eucalyptus grandis HOM05D006080 ORTHO05D007382 1.0e-14 85.9 113 37.2
Psat7g154760 Pisum sativum HOM05D006080 ORTHO05D007382 3.0e-11 74.3 66 56.1
Ca_14668_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 1.8e-08 65.1 68 48.5
SGA_v2.0_scaffold32G13359 Striga asiatica HOM05D005622 ORTHO05D002854 9.1e-08 62.8 133 28.6
SGA_v2.0_scaffold63G21630 Striga asiatica HOM05D005622 ORTHO05D002854 1.6e-07 62.0 133 28.6
MSTRG.13447 Avicennia marina HOM05D005622 ORTHO05D002854 5.0e-06 57.0 133 29.3
Hma1.2p1_3105F.1_g332750 Hydrangea macrophylla HOM05D006080 ORTHO05D007382 5.0e-06 57.0 90 35.6
Peaxi162Scf01290g00029 Petunia axillaris HOM05D006080 ORTHO05D007382 8.5e-06 56.2 111 32.4


User provided reference genes

Program Settings