Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 3.1e-51 204.9 109 100.0
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 5.7e-45 184.1 109 90.8
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 2.1e-39 165.6 109 83.5
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 2.4e-35 152.1 108 74.1
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 5.9e-34 147.5 108 72.2
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 4.7e-31 137.9 106 67.0
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 3.0e-30 135.2 107 67.3
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 6.8e-30 134.0 105 69.5
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.2e-29 133.3 108 67.6
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 1.3e-28 129.8 103 66.0
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 2.8e-28 128.6 108 64.8
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 3.7e-28 128.3 103 63.1
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 6.3e-28 127.5 108 64.8
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 7.0e-27 124.0 108 63.0
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 9.1e-27 123.6 108 60.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 2.0e-26 122.5 105 60.0
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 2.7e-26 122.1 103 59.2
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 4.5e-26 121.3 101 64.4
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 5.9e-26 120.9 100 62.0
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 7.7e-26 120.6 109 60.6
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 7.7e-26 120.6 110 60.9
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 1.0e-25 120.2 105 62.9
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 1.3e-25 119.8 106 60.4
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 1.3e-25 119.8 103 60.2
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 2.3e-25 119.0 108 60.2
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 3.8e-25 118.2 101 62.4
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 8.6e-25 117.1 106 55.7
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 1.1e-24 116.7 106 58.5
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 1.1e-24 116.7 91 63.7
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 1.9e-24 115.9 105 59.0
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 2.5e-24 115.5 108 58.3
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 3.3e-24 115.2 106 57.5
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 3.3e-24 115.2 105 59.0
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 4.2e-24 114.8 105 59.0
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 5.5e-24 114.4 104 60.6
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 5.5e-24 114.4 106 61.3
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 9.5e-24 113.6 106 60.4
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 9.5e-24 113.6 108 58.3
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 1.6e-23 112.8 108 55.6
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 1.6e-23 112.8 107 58.9
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 2.1e-23 112.5 103 57.3
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 2.8e-23 112.1 103 57.3
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 3.6e-23 111.7 109 56.0
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 4.7e-23 111.3 106 54.7
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 6.1e-23 110.9 106 56.6
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 1.4e-22 109.8 104 56.7
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 1.8e-22 109.4 109 57.8
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 1.8e-22 109.4 109 57.8
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 1.8e-22 109.4 104 57.7
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 2.3e-22 109.0 104 54.8
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 2.3e-22 109.0 108 57.4
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 6.8e-22 107.5 104 58.7
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 6.8e-22 107.5 107 56.1
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 1.5e-21 106.3 110 57.3
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 2.0e-21 105.9 109 53.2
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 2.0e-21 105.9 105 55.2
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 2.0e-21 105.9 105 55.2
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 2.6e-21 105.5 105 53.3
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 2.6e-21 105.5 108 54.6
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 3.4e-21 105.1 93 61.3
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 3.4e-21 105.1 109 54.1
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 3.4e-21 105.1 109 54.1
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 5.7e-21 104.4 105 56.2
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 9.8e-21 103.6 109 53.2
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.3e-20 103.2 108 54.6
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.3e-20 103.2 108 54.6
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.2e-20 102.4 109 53.2
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 2.2e-20 102.4 109 53.2
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 2.2e-20 102.4 104 54.8
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 3.7e-20 101.7 107 55.1
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 4.9e-20 101.3 106 51.9
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 4.9e-20 101.3 106 56.6
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 8.3e-20 100.5 108 54.6
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 1.8e-19 99.4 102 52.9
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 3.1e-19 98.6 114 50.9
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 3.1e-19 98.6 87 58.6
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 7.0e-19 97.4 85 61.2
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 7.0e-19 97.4 109 50.5
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 7.0e-19 97.4 113 50.4
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.2e-18 96.7 81 63.0
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 1.6e-18 96.3 114 51.8
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 2.0e-18 95.9 114 52.6
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 2.0e-18 95.9 114 50.9
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 3.5e-18 95.1 106 50.9
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 3.5e-18 95.1 87 57.5
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 4.5e-18 94.7 114 50.0
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 4.5e-18 94.7 89 53.9
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 5.9e-18 94.4 87 54.0
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 1.0e-17 93.6 114 51.8
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 1.3e-17 93.2 89 55.1
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 2.9e-17 92.0 87 55.2
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 8.6e-17 90.5 107 51.4
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 2.5e-16 89.0 88 51.1
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 4.3e-16 88.2 114 50.0
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 8.9e-14 80.5 85 49.4
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 3.4e-13 78.6 109 41.3
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 7.5e-13 77.4 90 45.6
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 2.7e-10 68.9 86 44.2
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 7.8e-10 67.4 73 49.3
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 7.8e-10 67.4 73 49.3
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 6.8e-06 54.3 53 49.1


User provided reference genes

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