Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 7.9e-112 407.1 207 100.0
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 3.9e-103 378.3 198 96.0
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 4.2e-97 358.2 207 88.4
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 1.6e-96 356.3 207 86.0
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.0e-90 337.0 207 81.2
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 3.8e-90 335.1 206 79.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.1e-89 333.6 207 79.2
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 4.6e-88 328.2 206 77.2
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 1.1e-86 323.6 203 79.3
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 2.8e-85 318.9 207 78.3
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 7.9e-80 300.8 190 77.4
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.3e-78 295.4 181 78.5
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.3e-78 295.4 202 70.8
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 7.4e-78 294.3 211 70.6
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 7.4e-78 294.3 181 77.9
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.8e-77 292.4 181 77.3
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.7e-77 292.0 181 77.9
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 4.8e-77 291.6 185 76.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 6.3e-77 291.2 179 77.1
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 6.3e-77 291.2 192 75.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 8.2e-77 290.8 198 73.7
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 8.2e-77 290.8 182 75.8
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 8.2e-77 290.8 173 79.2
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.4e-76 290.0 182 75.8
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.4e-76 289.3 179 75.4
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.4e-76 289.3 199 70.9
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 2.4e-76 289.3 196 70.4
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 2.4e-76 289.3 213 67.1
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.1e-76 288.9 190 74.2
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 4.1e-76 288.5 193 72.0
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 5.3e-76 288.1 206 69.9
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 5.3e-76 288.1 198 67.7
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 6.9e-76 287.7 172 80.2
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.5e-75 286.6 183 75.4
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 2.0e-75 286.2 212 68.9
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 2.0e-75 286.2 193 69.9
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.5e-75 285.0 183 74.9
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 4.5e-75 285.0 203 70.9
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.2e-74 282.7 205 67.8
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 2.2e-74 282.7 209 65.6
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.2e-74 282.7 176 75.0
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.2e-74 282.7 220 65.5
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 2.2e-74 282.7 177 73.4
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 5.0e-74 281.6 209 67.0
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 5.5e-73 278.1 183 71.6
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 5.5e-73 278.1 203 67.5
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 9.4e-73 277.3 179 74.9
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.2e-72 276.9 206 67.5
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 4.7e-72 275.0 177 75.1
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.0e-71 273.9 187 70.1
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.8e-71 273.1 179 69.8
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 3.0e-71 272.3 175 73.1
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 3.0e-71 272.3 185 68.6
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 3.0e-71 272.3 202 68.3
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 5.2e-71 271.6 176 71.6
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 6.7e-71 271.2 196 68.4
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 6.7e-71 271.2 196 68.4
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 6.7e-71 271.2 196 68.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-70 270.4 190 68.9
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 2.6e-70 269.2 200 65.0
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 5.7e-70 268.1 188 68.6
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 7.4e-70 267.7 203 64.0
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 7.4e-70 267.7 203 64.0
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 7.4e-70 267.7 188 69.1
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 7.4e-70 267.7 175 72.0
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.3e-69 266.9 171 72.5
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-69 266.5 210 63.8
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.7e-69 266.5 210 63.8
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 3.7e-69 265.4 193 67.4
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 8.2e-69 264.2 208 63.5
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 3.1e-68 262.3 220 60.5
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 7.0e-68 261.2 190 66.8
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 9.1e-68 260.8 213 62.4
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 9.1e-68 260.8 175 68.6
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 3.5e-67 258.8 174 69.0
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 4.5e-67 258.5 176 68.2
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 7.7e-67 257.7 173 69.9
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.0e-66 257.3 191 66.0
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-66 256.9 202 61.9
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 3.8e-66 255.4 166 77.1
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 5.0e-66 255.0 176 65.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.1e-65 253.8 164 73.8
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 9.4e-65 250.8 182 68.1
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 4.0e-63 245.4 182 67.0
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 5.2e-63 245.0 203 64.5
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 4.4e-62 241.9 170 71.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 9.7e-62 240.7 189 64.6
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.8e-60 236.5 175 65.7
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.0e-58 230.7 175 65.7
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.3e-58 230.3 167 67.1
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.5e-57 226.1 203 62.1
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 4.2e-57 225.3 172 66.3
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 3.6e-56 222.2 137 73.0
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.2e-55 218.4 178 61.2
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 5.2e-55 218.4 190 58.9
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 2.2e-53 213.0 226 56.6
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 7.0e-52 208.0 171 59.6
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.7e-50 203.4 143 68.5
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.8e-47 193.4 149 63.1
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 3.0e-47 192.6 124 75.0
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 4.0e-47 192.2 161 62.1
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.3e-45 187.2 169 51.5
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 8.3e-45 184.5 162 51.9
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 3.5e-43 179.1 180 51.7
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 4.5e-43 178.7 180 49.4
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 5.0e-42 175.3 154 59.1
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.3e-41 172.2 205 46.8
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 6.0e-35 151.8 107 71.0
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 7.8e-35 151.4 100 69.0
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 8.6e-34 147.9 123 61.8
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-33 146.7 106 67.0
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.2e-32 144.1 85 77.6
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.1e-32 143.3 106 67.0
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 3.4e-30 136.0 117 59.8
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 6.4e-29 131.7 88 69.3
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 5.1e-26 122.1 126 53.2
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 1.9e-25 120.2 122 50.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 7.3e-25 118.2 85 61.2
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.8e-23 113.6 143 44.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 4.0e-23 112.5 71 78.9
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 6.8e-23 111.7 113 51.3
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 3.2e-20 102.8 99 57.6
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 2.8e-16 89.7 51 80.4
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 4.0e-15 85.9 69 66.7
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 2.0e-14 83.6 101 50.5
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.9e-12 77.0 45 77.8
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 3.0e-10 69.7 48 68.8
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 6.6e-10 68.6 111 30.6
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 4.3e-09 65.9 42 76.2


User provided reference genes

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