Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G018700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 4.9e-67 258.1 173 100.0
VMungo1309G1226 Vigna mungo HOM05D003331 ORTHO05D003264 1.5e-47 193.4 176 79.0
Glyma.04G022100 Glycine max HOM05D000531 ORTHO05D003264 2.3e-32 142.9 188 54.8
Glyma.06G022300 Glycine max HOM05D000531 ORTHO05D003264 1.5e-28 130.2 189 51.9
Lj1g0008463 Lotus japonicus HOM05D003331 ORTHO05D003264 4.7e-17 92.0 189 39.2
HPP92_022194 Vanilla planifolia HOM05D003331 ORTHO05D003264 1.6e-09 67.0 75 57.3
HPP92_022184 Vanilla planifolia HOM05D003331 ORTHO05D003264 3.6e-09 65.9 75 56.0
CDE09G0805 Ceratophyllum demersum HOM05D003331 ORTHO05D003264 6.1e-09 65.1 75 54.7
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 1.0e-08 64.3 84 47.6
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.0e-08 62.4 114 42.1
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 5.2e-08 62.0 84 47.6
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 6.8e-08 61.6 50 66.0
CDE02G3807 Ceratophyllum demersum HOM05D000531 ORTHO05D003264 6.8e-08 61.6 75 56.0
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 8.8e-08 61.2 75 49.3
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 8.8e-08 61.2 84 46.4
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 8.8e-08 61.2 75 49.3
Actinidia17008 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.2e-07 60.8 73 52.1
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.2e-07 60.8 75 49.3
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 1.2e-07 60.8 75 50.7
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.2e-07 60.8 84 47.6
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.5e-07 60.5 93 48.4
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.5e-07 60.5 75 49.3
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.5e-07 60.5 83 48.2
MELO3C013748.2 Cucumis melo HOM05D003331 ORTHO05D003264 2.0e-07 60.1 75 50.7
CsaV3_3G000600 Cucumis sativus L. HOM05D003331 ORTHO05D003264 2.0e-07 60.1 75 50.7
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 2.0e-07 60.1 45 71.1
AL5G38230 Arabidopsis lyrata HOM05D000531 ORTHO05D001630 2.6e-07 59.7 75 56.0
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.6e-07 59.7 75 48.0
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 2.6e-07 59.7 75 48.0
PSO339G0899 Papaver somniferum HOM05D000531 ORTHO05D001630 2.6e-07 59.7 75 56.0
PSO384G4223 Papaver somniferum HOM05D000531 ORTHO05D001630 2.6e-07 59.7 75 56.0
Sabra02G0014700 Salix brachista HOM05D003331 ORTHO05D003264 2.6e-07 59.7 75 50.7
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 2.6e-07 59.7 75 48.0
Actinidia15450 Actinidia chinensis HOM05D003331 ORTHO05D003264 3.4e-07 59.3 73 50.7
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 3.4e-07 59.3 124 37.9
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 3.4e-07 59.3 75 52.0
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.4e-07 59.3 75 50.7
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.4e-07 59.3 75 50.7
PGR031G1921 Punica granatum HOM05D003331 ORTHO05D003264 3.4e-07 59.3 103 41.7
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 3.4e-07 59.3 96 45.8
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.4e-07 58.9 75 48.0
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 4.4e-07 58.9 75 53.3
Aa31LG10G11700 Aethionema arabicum HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
AT3G56850 Arabidopsis thaliana HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
BcaC07g39995 Brassica carinata HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 53.3
Carub.0005s2358 Capsella rubella HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
CARHR167000 Cardamine hirsuta HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
Thhalv10006121m.g Eutrema salsugineum HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
Medtr8g075130 Medicago truncatula HOM05D003331 ORTHO05D003264 5.7e-07 58.5 156 38.5
PSO541G2637 Papaver somniferum HOM05D003331 ORTHO05D003264 5.7e-07 58.5 134 37.3
PSO675G4415 Papaver somniferum HOM05D003331 ORTHO05D003264 5.7e-07 58.5 134 37.3
Sp5g05740 Schrenkiella parvula HOM05D000531 ORTHO05D001630 5.7e-07 58.5 75 54.7
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 7.5e-07 58.2 75 45.3
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 7.5e-07 58.2 91 44.0
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 7.5e-07 58.2 110 40.9
Gohir.A05G285300 Gossypium hirsutum HOM05D000531 ORTHO05D001630 7.5e-07 58.2 75 56.0
Gorai.009G301400 Gossypium raimondii HOM05D000531 ORTHO05D001630 7.5e-07 58.2 75 56.0
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 7.5e-07 58.2 75 48.0
unitig_21.g20150 Utricularia gibba HOM05D004720 ORTHO05D005359 7.5e-07 58.2 49 61.2
unitig_899.g15549 Utricularia gibba HOM05D000531 ORTHO05D003264 7.5e-07 58.2 56 57.1
BcaC02g09874 Brassica carinata HOM05D000531 ORTHO05D001630 9.8e-07 57.8 75 53.3
Glyma.11G080000 Glycine max HOM05D003331 ORTHO05D003264 9.8e-07 57.8 136 39.7
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 9.8e-07 57.8 127 37.8
PGR142G1180 Punica granatum HOM05D000531 ORTHO05D001630 9.8e-07 57.8 75 50.7
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 9.8e-07 57.8 45 68.9
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 9.8e-07 57.8 84 48.8
arahy.Tifrunner.gnm1.ann1.N4NI2R Arachis hypogaea HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 53.3
BcaC08g44808 Brassica carinata HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 53.3
FvH4_7g04850 Fragaria vesca HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 54.7
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.3e-06 57.4 49 61.2
Prupe.2G056800 Prunus persica HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 54.7
RcHm_v2.0_Chr1g0330441 Rosa chinensis HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 54.7
GSVIVG01001940001 Vitis vinifera HOM05D000531 ORTHO05D001630 1.3e-06 57.4 75 54.7
Aa31LG3G980 Aethionema arabicum HOM05D000531 ORTHO05D001630 1.7e-06 57.0 75 54.7
AUR62013917 Chenopodium quinoa HOM05D000531 ORTHO05D003264 1.7e-06 57.0 45 71.1
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 1.7e-06 57.0 75 48.0
HPP92_000657 Vanilla planifolia HOM05D000531 ORTHO05D001630 1.7e-06 57.0 74 55.4
HPP92_000689 Vanilla planifolia HOM05D000531 ORTHO05D001630 1.7e-06 57.0 74 55.4
Ah.03g143180 Amaranthus hybridus HOM05D000531 ORTHO05D003264 2.2e-06 56.6 61 55.7
ATR0180G005 Amborella trichopoda HOM05D000531 ORTHO05D003264 2.2e-06 56.6 75 46.7
CANSAT21G2102 Cannabis sativa HOM05D000531 ORTHO05D001630 2.2e-06 56.6 75 50.7
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.2e-06 56.6 75 49.3
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.2e-06 56.6 83 45.8
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 2.2e-06 56.6 75 48.0
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 2.2e-06 56.6 75 46.7
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 2.2e-06 56.6 85 44.7
Sc09g0004990 Simmondsia chinensis HOM05D000531 ORTHO05D001630 2.2e-06 56.6 75 52.0
BcaC07g40114 Brassica carinata HOM05D000531 ORTHO05D001630 2.8e-06 56.2 75 52.0
CiPaw.07G061800 Carya illinoinensis HOM05D000531 ORTHO05D003264 2.8e-06 56.2 51 58.8
AUR62018275 Chenopodium quinoa HOM05D003331 ORTHO05D003264 2.8e-06 56.2 75 54.7
Gohir.A05G285200 Gossypium hirsutum HOM05D000531 ORTHO05D001630 2.8e-06 56.2 75 54.7
MBI13_g00560_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 2.8e-06 56.2 75 54.7
MD07G1052500 Malus domestica HOM05D000531 ORTHO05D001630 2.8e-06 56.2 75 54.7
PGR083G0975 Punica granatum HOM05D003331 ORTHO05D003264 2.8e-06 56.2 63 52.4
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.7e-06 55.8 49 59.2
Lj3g0019182 Lotus japonicus HOM05D000531 ORTHO05D001630 3.7e-06 55.8 86 48.8
Lalb_Chr19g0132611 Lupinus albus HOM05D000531 ORTHO05D001630 3.7e-06 55.8 75 53.3
Thecc.10G131000 Theobroma cacao HOM05D000531 ORTHO05D001630 3.7e-06 55.8 84 48.8
TAR633G1290 Trochodendron aralioides HOM05D000531 ORTHO05D001630 3.7e-06 55.8 75 53.3
unitig_46.g18482 Utricularia gibba HOM05D000531 ORTHO05D001630 3.7e-06 55.8 75 53.3
MSTRG.22349 Avicennia marina HOM05D003331 ORTHO05D003264 4.9e-06 55.5 75 46.7
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 4.9e-06 55.5 75 50.7
Glyma.03G003400 Glycine max HOM05D000531 ORTHO05D001630 4.9e-06 55.5 75 50.7
Glyma.15G222400 Glycine max HOM05D000531 ORTHO05D001630 4.9e-06 55.5 75 53.3
MSTRG.26201 Avicennia marina HOM05D000531 ORTHO05D001630 6.3e-06 55.1 76 51.3
ClCG08G008570 Citrullus lanatus HOM05D000531 ORTHO05D001630 6.3e-06 55.1 84 48.8
CsaV3_6G004560 Cucumis sativus L. HOM05D000531 ORTHO05D001630 6.3e-06 55.1 84 48.8
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 6.3e-06 55.1 54 61.1
Glyma.04G124200 Glycine max HOM05D000531 ORTHO05D001630 6.3e-06 55.1 88 46.6
Lalb_Chr22g0358261 Lupinus albus HOM05D000531 ORTHO05D001630 6.3e-06 55.1 75 52.0
MD02G1266800 Malus domestica HOM05D000531 ORTHO05D001630 6.3e-06 55.1 75 53.3
Mapoly0069s0009 Marchantia polymorpha HOM05D000531 ORTHO05D000877 6.3e-06 55.1 57 54.4
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 6.3e-06 55.1 86 46.5
Sc02g0008740 Simmondsia chinensis HOM05D003331 ORTHO05D003264 6.3e-06 55.1 75 49.3
VMungo1383G2950 Vigna mungo HOM05D000531 ORTHO05D001630 6.3e-06 55.1 75 52.0
EL10Ac1g02139 Beta vulgaris HOM05D003331 ORTHO05D003264 8.3e-06 54.7 73 53.4
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 8.3e-06 54.7 127 39.4
Glyma.19G122800 Glycine max HOM05D000531 ORTHO05D001630 8.3e-06 54.7 75 50.7
Lj1g0026220 Lotus japonicus HOM05D000531 ORTHO05D001630 8.3e-06 54.7 75 53.3
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 8.3e-06 54.7 75 48.0
vmacro02041 Vaccinium macrocarpon HOM05D000531 ORTHO05D000877 8.3e-06 54.7 66 50.0
HPP92_012946 Vanilla planifolia HOM05D003331 ORTHO05D003264 8.3e-06 54.7 70 50.0
Zm00001eb272230 Zea mays HOM05D021585 ORTHO05D003264 8.3e-06 54.7 81 46.9


User provided reference genes

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