Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.8e-51 204.5 101 100.0
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.2e-42 174.9 94 89.4
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.5e-36 156.0 95 81.1
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 9.0e-29 130.2 95 66.3
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.4e-28 128.3 94 67.0
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 7.7e-28 127.1 94 66.0
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.0e-27 126.7 94 64.9
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 2.9e-27 125.2 94 66.0
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 6.5e-27 124.0 94 66.0
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 6.5e-27 124.0 94 63.8
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 8.5e-27 123.6 101 61.4
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.4e-26 122.9 94 64.9
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 1.4e-26 122.9 97 64.9
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.2e-26 121.7 107 57.9
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 4.2e-26 121.3 99 61.6
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 5.5e-26 120.9 96 60.4
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.4e-26 120.2 94 60.6
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 9.4e-26 120.2 101 59.4
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 2.1e-25 119.0 100 62.0
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.1e-25 119.0 110 56.4
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-25 119.0 97 63.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-25 119.0 97 63.9
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 3.6e-25 118.2 98 62.2
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.6e-25 117.9 95 63.2
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.1e-25 117.5 97 62.9
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 6.1e-25 117.5 95 62.1
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 7.9e-25 117.1 94 61.7
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 7.9e-25 117.1 94 61.7
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 7.9e-25 117.1 94 61.7
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.4e-24 116.3 94 60.6
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.4e-24 116.3 97 60.8
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 1.8e-24 115.9 94 61.7
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.3e-24 115.5 97 61.9
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.0e-24 115.2 95 64.2
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 3.9e-24 114.8 97 58.8
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 3.9e-24 114.8 95 62.1
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 6.7e-24 114.0 94 60.6
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 6.7e-24 114.0 94 60.6
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.1e-23 113.2 97 58.8
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.5e-23 112.8 97 60.8
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.5e-23 112.8 94 61.7
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 4.3e-23 111.3 102 56.9
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 4.3e-23 111.3 98 59.2
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.3e-23 111.3 94 57.4
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 7.4e-23 110.5 95 58.9
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 9.7e-23 110.2 95 58.9
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.3e-22 109.8 98 59.2
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.3e-22 109.8 94 59.6
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 1.7e-22 109.4 96 58.3
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.7e-22 109.4 95 60.0
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 1.7e-22 109.4 95 61.1
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 1.7e-22 109.4 94 59.6
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.7e-22 109.4 94 59.6
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.7e-22 109.4 94 59.6
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.2e-22 109.0 109 54.1
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.8e-22 108.6 98 57.1
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.7e-22 108.2 95 58.9
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 6.3e-22 107.5 94 57.4
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.3e-22 107.5 99 57.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 8.2e-22 107.1 105 55.2
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.1e-21 106.7 98 56.1
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.4e-21 106.3 95 53.7
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.4e-21 106.3 94 57.4
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.4e-21 106.3 95 57.9
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.8e-21 105.9 99 56.6
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.8e-21 105.9 99 56.6
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.8e-21 105.9 99 56.6
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 2.4e-21 105.5 101 51.5
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 3.1e-21 105.1 105 54.3
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 4.1e-21 104.8 97 55.7
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 4.1e-21 104.8 95 57.9
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.3e-21 104.4 108 50.0
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 5.3e-21 104.4 98 58.2
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.3e-21 104.4 95 56.8
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 6.9e-21 104.0 108 49.1
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.9e-21 104.0 99 52.5
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.9e-21 104.0 99 53.5
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 6.9e-21 104.0 98 52.0
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 9.1e-21 103.6 104 51.0
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 9.1e-21 103.6 106 50.9
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.0e-20 102.4 95 55.8
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 2.6e-20 102.1 105 53.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 2.6e-20 102.1 94 54.3
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.6e-20 102.1 100 53.0
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 4.5e-20 101.3 97 56.7
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.9e-20 100.9 95 55.8
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 7.7e-20 100.5 94 52.1
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.7e-20 100.5 110 50.0
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.3e-19 99.8 95 55.8
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.3e-19 99.8 106 50.0
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.7e-19 99.4 105 49.5
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.5e-19 97.4 95 53.7
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.9e-18 95.9 94 48.9
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.5e-18 95.5 105 49.5
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.2e-18 95.1 100 52.0
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 4.2e-18 94.7 108 46.3
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 4.2e-18 94.7 108 46.3
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 5.5e-18 94.4 108 45.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 5.5e-18 94.4 108 45.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 5.5e-18 94.4 108 45.4
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 5.5e-18 94.4 96 55.2
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 9.4e-18 93.6 107 47.7
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.2e-17 93.2 109 46.8
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-17 92.4 111 45.9
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 2.7e-17 92.0 98 49.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 3.6e-17 91.7 106 47.2
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.7e-17 91.3 99 48.5
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.4e-16 89.7 106 44.3
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.8e-16 89.4 102 49.0
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.3e-16 89.0 112 45.5
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 3.0e-16 88.6 106 44.3
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.0e-16 88.6 102 45.1
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 6.7e-16 87.4 99 47.5
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 1.1e-15 86.7 111 45.9
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.3e-15 85.1 102 46.1
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 3.3e-15 85.1 108 42.6
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 3.3e-15 85.1 108 42.6
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 3.3e-15 85.1 108 42.6
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 3.3e-15 85.1 97 49.5
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 3.3e-15 85.1 86 48.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 5.7e-15 84.3 104 48.1
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 1.2e-12 76.6 86 46.5
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 5.9e-12 74.3 62 64.5
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.9e-11 72.0 79 45.6
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.8e-11 71.6 101 43.6
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 8.5e-11 70.5 103 39.8
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.7e-06 56.2 66 45.5


User provided reference genes

Program Settings