Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.3e-63 245.4 121 100.0
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 4.1e-52 208.0 123 90.2
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.8e-45 185.3 121 83.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 4.1e-44 181.4 122 81.1
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 4.7e-32 141.4 131 59.5
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.1e-28 130.2 124 69.4
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 2.4e-28 129.0 130 56.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 5.4e-28 127.9 119 63.0
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.2e-27 126.7 97 68.0
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.6e-27 126.3 138 55.8
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.0e-26 123.6 118 59.3
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.0e-26 121.3 93 72.0
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 8.6e-26 120.6 95 70.5
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.5e-25 119.0 132 53.0
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 3.3e-25 118.6 123 57.7
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 3.3e-25 118.6 124 57.3
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 5.6e-25 117.9 121 56.2
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 9.5e-25 117.1 117 55.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 9.5e-25 117.1 113 60.2
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 2.1e-24 115.9 120 54.2
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 2.1e-24 115.9 120 54.2
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.6e-24 115.2 86 72.1
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.6e-24 115.2 86 72.1
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.6e-24 115.2 113 59.3
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 3.6e-24 115.2 113 59.3
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 8.0e-24 114.0 84 69.0
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 8.0e-24 114.0 138 50.0
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.0e-23 113.6 83 69.9
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.4e-23 113.2 121 52.9
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.4e-23 113.2 138 50.0
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 1.8e-23 112.8 83 68.7
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.8e-23 112.8 121 52.9
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 2.3e-23 112.5 128 53.9
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 3.1e-23 112.1 116 58.6
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.2e-22 110.2 121 52.1
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.7e-21 106.3 125 50.4
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.2e-21 105.9 86 64.0
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.7e-21 105.1 85 64.7
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 3.7e-21 105.1 87 64.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 4.9e-21 104.8 85 65.9
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.4e-20 103.2 126 53.2
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.9e-20 102.8 83 61.4
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.9e-20 102.8 86 62.8
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 3.2e-20 102.1 81 60.5
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 4.1e-20 101.7 122 51.6
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 4.1e-20 101.7 83 62.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 5.4e-20 101.3 110 53.6
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 5.4e-20 101.3 99 57.6
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.6e-19 99.8 81 63.0
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.6e-19 99.8 120 49.2
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.6e-19 98.2 124 51.6
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 2.3e-18 95.9 123 43.9
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 5.0e-18 94.7 108 54.6
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.1e-17 93.6 140 46.4
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.5e-17 93.2 92 54.3
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.9e-17 92.8 88 58.0
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.9e-17 92.8 118 43.2
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.5e-17 92.4 118 44.1
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 4.3e-17 91.7 105 54.3
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.6e-16 89.7 126 51.6
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 2.8e-16 89.0 76 60.5
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 3.6e-16 88.6 79 58.2
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 6.2e-16 87.8 82 59.8
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 8.1e-16 87.4 135 45.2
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.4e-15 86.7 123 42.3
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 4.0e-15 85.1 54 75.9
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.2e-14 83.6 93 50.5
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.0e-14 82.8 126 42.9
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.6e-14 82.4 90 48.9
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 2.6e-14 82.4 90 48.9
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 2.6e-14 82.4 90 48.9
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.6e-14 82.4 90 48.9
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.4e-14 81.6 66 60.6
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 4.4e-14 81.6 91 48.4
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 5.8e-14 81.3 85 56.5
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 7.5e-14 80.9 82 58.5
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 7.5e-14 80.9 76 59.2
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.3e-13 80.1 68 64.7
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.3e-13 80.1 68 64.7
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.2e-13 79.3 75 57.3
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 2.2e-13 79.3 73 60.3
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 3.7e-13 78.6 90 47.8
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 1.1e-12 77.0 68 63.2
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 1.1e-12 77.0 68 63.2
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 1.4e-12 76.6 73 61.6
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.4e-12 76.6 68 63.2
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 7.1e-12 74.3 71 59.2
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 9.2e-12 73.9 80 46.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.7e-11 72.4 75 50.7
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 4.6e-11 71.6 72 58.3
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 6.0e-11 71.2 68 57.4
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 6.0e-11 71.2 73 53.4
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 7.8e-11 70.9 68 58.8
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 1.0e-10 70.5 102 48.0
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.3e-10 70.1 68 57.4
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.3e-10 70.1 68 57.4
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.3e-10 70.1 76 52.6
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 5.1e-10 68.2 79 48.1
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 6.6e-10 67.8 83 50.6
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 6.6e-10 67.8 70 55.7
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 8.6e-10 67.4 100 44.0
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 8.6e-10 67.4 72 55.6
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-08 63.2 71 46.5
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.1e-08 62.8 79 46.8
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 2.6e-06 55.8 84 45.2
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 9.9e-06 53.9 87 43.7


User provided reference genes

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