Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 7.4e-33 143.3 72 100.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.7e-27 124.8 66 97.0
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.7e-27 124.8 66 95.5
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.1e-25 119.4 66 87.9
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.9e-25 118.6 66 89.4
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 3.3e-25 117.9 66 87.9
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 4.3e-25 117.5 66 89.4
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 4.3e-25 117.5 66 89.4
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 5.7e-25 117.1 66 87.9
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 5.7e-25 117.1 66 89.4
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 9.6e-25 116.3 66 86.4
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 9.6e-25 116.3 66 87.9
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 2.8e-24 114.8 66 83.3
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 2.8e-24 114.8 66 83.3
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 3.7e-24 114.4 66 81.8
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 4.8e-24 114.0 66 83.3
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 6.2e-24 113.6 66 81.8
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 8.2e-24 113.2 66 83.3
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 8.2e-24 113.2 66 83.3
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 1.1e-23 112.8 69 79.7
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.1e-23 112.8 66 80.3
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.1e-23 112.8 66 83.3
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.1e-23 112.8 66 81.8
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.4e-23 112.5 66 84.8
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 2.4e-23 111.7 69 78.3
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 3.1e-23 111.3 66 80.3
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 4.0e-23 110.9 66 81.8
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 4.0e-23 110.9 66 77.3
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 5.3e-23 110.5 66 78.8
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 5.3e-23 110.5 65 80.0
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 6.9e-23 110.2 66 80.3
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 6.9e-23 110.2 66 77.3
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 6.9e-23 110.2 69 76.8
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 6.9e-23 110.2 65 78.5
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 6.9e-23 110.2 66 78.8
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 9.0e-23 109.8 66 78.8
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 9.0e-23 109.8 66 78.8
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.2e-22 109.4 66 80.3
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.2e-22 109.4 66 80.3
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.2e-22 109.4 66 80.3
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.2e-22 109.4 66 78.8
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.2e-22 109.4 66 75.8
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.5e-22 109.0 66 78.8
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 1.5e-22 109.0 66 78.8
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.5e-22 109.0 66 77.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.5e-22 109.0 66 77.3
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 2.0e-22 108.6 66 77.3
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.0e-22 108.6 66 77.3
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 2.0e-22 108.6 66 80.3
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 2.0e-22 108.6 66 78.8
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.6e-22 108.2 66 75.8
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.6e-22 108.2 66 77.3
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 3.4e-22 107.8 66 77.3
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 3.4e-22 107.8 66 75.8
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 3.4e-22 107.8 66 77.3
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 3.4e-22 107.8 66 77.3
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 4.5e-22 107.5 66 75.8
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 4.5e-22 107.5 66 75.8
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 4.5e-22 107.5 66 75.8
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 4.5e-22 107.5 66 77.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.8e-22 107.1 66 77.3
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 7.6e-22 106.7 65 76.9
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 7.6e-22 106.7 66 75.8
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.0e-21 106.3 66 74.2
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.0e-21 106.3 65 76.9
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.3e-21 105.9 66 78.8
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.3e-21 105.9 66 74.2
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.3e-21 105.9 66 74.2
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.7e-21 105.5 66 75.8
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.2e-21 105.1 66 74.2
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.2e-21 105.1 66 77.3
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.9e-21 104.8 65 80.0
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 3.8e-21 104.4 66 72.7
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 5.0e-21 104.0 66 71.2
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 6.5e-21 103.6 66 74.2
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 8.4e-21 103.2 66 74.2
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 8.4e-21 103.2 66 74.2
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 8.4e-21 103.2 66 80.3
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.1e-20 102.8 67 76.1
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.1e-20 102.8 67 76.1
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.1e-20 102.8 67 76.1
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.1e-20 102.8 66 72.7
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.1e-20 102.8 66 71.2
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.1e-20 102.8 66 74.2
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.4e-20 102.4 66 75.8
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.4e-20 102.4 66 72.7
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.4e-20 102.4 66 74.2
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.5e-20 101.7 66 71.2
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.5e-20 101.7 66 71.2
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.5e-20 101.7 66 74.2
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 4.2e-20 100.9 65 73.8
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 7.1e-20 100.1 73 68.5
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.2e-19 99.4 66 69.7
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.2e-19 99.4 79 65.8
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.2e-19 99.4 59 81.4
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.2e-19 99.4 66 68.2
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 2.1e-19 98.6 66 72.7
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 2.7e-19 98.2 65 70.8
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 2.7e-19 98.2 65 70.8
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.7e-19 98.2 66 68.2
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.7e-19 98.2 66 68.2
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 6.1e-19 97.1 66 69.7
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 7.9e-19 96.7 66 63.6
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.3e-18 95.9 66 66.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.3e-18 95.9 67 70.1
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.3e-18 95.1 65 72.3
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-18 94.7 69 71.0
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 5.1e-18 94.0 66 68.2
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 3.3e-17 91.3 65 69.2
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.1e-15 86.3 73 61.6
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.1e-15 86.3 65 63.1
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 1.8e-15 85.5 73 61.6
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.0e-14 82.0 67 64.2
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.9e-12 75.5 36 88.9
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.2e-11 72.8 48 70.8
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 2.7e-11 71.6 40 80.0
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 3.0e-10 68.2 41 75.6
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 7.4e-09 63.5 69 49.3
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 3.4e-06 54.7 23 100.0
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.9e-06 53.9 26 88.5


User provided reference genes

Program Settings