Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G015800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.6e-104 382.1 196 100.0
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 7.3e-51 204.5 190 62.1
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.8e-41 173.3 168 60.1
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 8.4e-39 164.5 198 48.0
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 9.3e-38 161.0 210 45.7
Phvul.006G191400 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 1.2e-37 160.6 234 42.7
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 3.3e-35 152.5 199 44.2
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.3e-33 145.2 163 50.9
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.5e-32 143.7 139 56.8
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.3e-31 140.6 142 54.9
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.3e-27 125.6 208 38.5
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-23 113.2 210 32.9
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-22 109.0 214 32.7
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-22 109.0 214 32.7
Phvul.005G044800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 5.5e-22 108.6 99 57.6
Phvul.003G117700 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 1.2e-21 107.5 67 74.6
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 1.0e-20 104.4 214 35.0
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 1.0e-20 104.4 214 35.0
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 3.9e-20 102.4 211 31.3
TPR.G26714 Trifolium pratense HOM05D011524 ORTHO05D009491 8.7e-20 101.3 180 32.8
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.1e-19 100.9 150 43.3
TPR.G36881 Trifolium pratense HOM05D011524 ORTHO05D009491 1.1e-19 100.9 218 31.2
TPR.G19823 Trifolium pratense HOM05D011527 ORTHO05D009491 4.3e-19 99.0 200 33.0
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 2.8e-18 96.3 188 31.9
TPR.G34472 Trifolium pratense HOM05D011524 ORTHO05D009491 3.7e-18 95.9 197 32.5
TPR.G35040 Trifolium pratense HOM05D011524 ORTHO05D009491 1.1e-17 94.4 185 30.8
TPR.G17919 Trifolium pratense HOM05D011527 ORTHO05D009491 1.4e-17 94.0 200 30.5
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.1e-17 92.8 136 44.1
TPR.G20476 Trifolium pratense HOM05D011524 ORTHO05D009491 6.9e-17 91.7 166 33.1
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 1.5e-16 90.5 138 37.0
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 2.9e-15 86.3 190 31.1
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 8.5e-15 84.7 124 36.3
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 8.5e-15 84.7 196 28.1
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 9.4e-14 81.3 149 33.6
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 4.6e-13 79.0 192 29.2
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 4.6e-13 79.0 192 29.2
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 4.6e-13 79.0 124 35.5
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.4e-12 77.4 192 28.6
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.4e-12 77.4 192 28.6
arahy.Tifrunner.gnm1.ann1.GFA6QK Arachis hypogaea HOM05D007499 ORTHO05D009491 3.9e-12 75.9 147 35.4
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-12 75.5 192 27.6
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.1e-12 75.5 192 28.1
arahy.Tifrunner.gnm1.ann1.CT1CGZ Arachis hypogaea HOM05D007499 ORTHO05D009491 6.7e-12 75.1 198 28.3
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 1.1e-11 74.3 78 46.2
TPR.G30051 Trifolium pratense HOM05D000023 ORTHO05D009491 2.5e-11 73.2 152 30.9
Lj6g0004966 Lotus japonicus HOM05D011527 ORTHO05D009491 2.2e-10 70.1 202 28.7
TPR.G39727 Trifolium pratense HOM05D028938 ORTHO05D009491 4.8e-10 68.9 166 25.9
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 6.3e-10 68.6 174 28.7
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 6.3e-10 68.6 190 28.4
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 1.1e-09 67.8 157 29.9
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 1.4e-09 67.4 61 47.5
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 3.1e-09 66.2 168 26.2
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 3.1e-09 66.2 179 26.3
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 6.9e-09 65.1 176 25.6
TPR.G16855 Trifolium pratense HOM05D007499 ORTHO05D009491 9.1e-09 64.7 185 25.4
arahy.Tifrunner.gnm1.ann1.H3FPA3 Arachis hypogaea HOM05D010000 ORTHO05D009491 1.2e-08 64.3 67 44.8
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 1.2e-08 64.3 190 25.3
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 1.5e-08 63.9 185 23.8
Lj3g0020532 Lotus japonicus HOM05D031098 ORTHO05D015701 2.0e-08 63.5 104 37.5
TPR.G39019 Trifolium pratense HOM05D007499 ORTHO05D009491 2.0e-08 63.5 113 32.7
TPR.G10066 Trifolium pratense HOM05D011527 ORTHO05D009491 2.6e-08 63.2 57 49.1
Psat1g061440 Pisum sativum HOM05D005144 ORTHO05D006112 3.4e-08 62.8 59 49.2
TPR.G15524 Trifolium pratense HOM05D007499 ORTHO05D009491 3.4e-08 62.8 180 27.8
TPR.G14905 Trifolium pratense HOM05D007499 ORTHO05D009491 5.9e-08 62.0 118 33.1
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 7.7e-08 61.6 204 25.0
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 1.0e-07 61.2 150 30.7
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.0e-07 61.2 165 25.5
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 1.0e-07 61.2 169 24.9
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 1.7e-07 60.5 118 29.7
TPR.G14129 Trifolium pratense HOM05D007499 ORTHO05D009491 2.2e-07 60.1 142 27.5
Lj4g0023858 Lotus japonicus HOM05D020041 ORTHO05D030020 2.9e-07 59.7 172 27.9
Medtr0042s0170 Medicago truncatula HOM05D007499 ORTHO05D009491 2.9e-07 59.7 112 26.8
Lj1g0026764 Lotus japonicus HOM05D029886 ORTHO05D030008 1.4e-06 57.4 107 30.8
TPR.G26497 Trifolium pratense HOM05D007499 ORTHO05D009491 1.4e-06 57.4 121 30.6
arahy.Tifrunner.gnm1.ann1.SFEY24 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.5e-06 56.6 64 37.5
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 5.5e-06 55.5 190 22.6
arahy.Tifrunner.gnm1.ann1.1SE4IN Arachis hypogaea HOM05D012160 ORTHO05D009491 7.2e-06 55.1 122 29.5
Medtr4g040040 Medicago truncatula HOM05D011527 ORTHO05D000174 9.4e-06 54.7 68 35.3


User provided reference genes

Program Settings