Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.1e-50 203.0 101 100.0
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.3e-48 195.3 101 95.0
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.8e-45 185.7 101 88.1
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.9e-42 175.6 101 81.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 2.5e-42 175.3 101 81.2
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 9.3e-42 173.3 97 85.6
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 7.9e-41 170.2 101 81.2
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 3.0e-40 168.3 97 83.5
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.1e-39 166.4 101 78.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.5e-39 166.0 101 79.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.5e-39 166.0 100 82.0
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 2.5e-39 165.2 97 80.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 7.4e-39 163.7 101 81.2
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 9.6e-39 163.3 101 80.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 9.6e-39 163.3 101 78.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.3e-38 162.9 102 79.4
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.8e-38 161.8 101 79.2
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 4.8e-38 161.0 101 81.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.3e-38 160.6 101 77.2
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.4e-37 159.5 97 79.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.8e-37 159.1 101 76.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.4e-37 158.7 100 76.0
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 3.1e-37 158.3 101 77.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.1e-37 157.9 99 77.8
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.5e-36 156.0 96 76.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.5e-36 156.0 92 79.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 90 83.3
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.6e-36 155.2 90 81.1
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.6e-36 155.2 100 79.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 3.4e-36 154.8 94 77.7
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 3.4e-36 154.8 93 78.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 4.5e-36 154.5 94 78.7
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 5.9e-36 154.1 99 76.8
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.9e-36 154.1 96 76.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 5.9e-36 154.1 96 76.0
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 5.9e-36 154.1 98 74.5
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 7.6e-36 153.7 97 75.3
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 7.6e-36 153.7 91 81.3
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 7.6e-36 153.7 101 75.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 7.6e-36 153.7 101 75.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.3e-35 152.9 90 81.1
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.3e-35 152.9 91 79.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.2e-35 152.1 99 75.8
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.2e-35 152.1 97 72.2
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.2e-35 152.1 90 81.1
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.9e-35 151.8 98 76.5
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 3.8e-35 151.4 96 72.9
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.8e-35 151.4 96 72.9
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.8e-35 151.4 96 72.9
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 8.4e-35 150.2 96 71.9
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 8.4e-35 150.2 97 75.3
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 8.4e-35 150.2 96 70.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 99 74.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 99 74.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.4e-34 149.4 99 74.7
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.4e-34 149.4 101 74.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.2e-34 148.3 96 71.9
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.2e-34 148.3 91 78.0
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 5.5e-34 147.5 105 70.5
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 7.2e-34 147.1 97 71.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 7.2e-34 147.1 101 72.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 7.2e-34 147.1 93 75.3
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.6e-33 146.0 101 68.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.6e-33 146.0 96 72.9
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-33 146.0 97 72.2
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 3.5e-33 144.8 101 72.3
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 4.6e-33 144.4 91 75.8
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.6e-33 144.4 99 73.7
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 6.1e-33 144.1 97 70.1
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 6.1e-33 144.1 92 75.0
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 7.9e-33 143.7 101 71.3
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-32 142.9 101 69.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.3e-32 142.9 101 69.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.3e-32 142.9 101 69.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.3e-32 142.9 101 69.3
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.8e-32 142.5 91 73.6
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.0e-32 141.7 101 68.3
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 3.0e-32 141.7 128 61.7
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.9e-32 141.4 82 79.3
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 5.1e-32 141.0 101 70.3
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 5.1e-32 141.0 101 68.3
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 6.7e-32 140.6 84 81.0
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.5e-31 139.4 91 72.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.5e-31 138.7 89 73.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 69.6
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 4.3e-31 137.9 92 70.7
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 9.7e-31 136.7 94 68.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.3e-30 136.3 82 79.3
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 3.7e-30 134.8 91 68.1
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 6.3e-30 134.0 82 78.0
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 6.3e-30 134.0 102 64.7
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 8.2e-30 133.7 91 69.2
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-29 133.3 91 69.2
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.4e-29 132.9 91 72.5
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.8e-29 132.5 91 69.2
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.8e-29 132.5 91 69.2
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.1e-29 131.7 91 68.1
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 4.5e-28 127.9 93 63.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.0e-27 126.7 85 72.9
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.0e-27 124.4 89 69.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 6.5e-27 124.0 85 69.4
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 8.5e-27 123.6 80 72.5
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.1e-26 123.2 81 70.4
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.5e-23 112.8 81 69.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 3.3e-23 111.7 64 82.8
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.2e-22 109.0 100 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 9.1e-21 103.6 81 59.3
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.2e-20 103.2 93 61.3
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 1.4e-18 96.3 72 65.3
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 2.1e-17 92.4 89 50.6
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 2.7e-17 92.0 93 51.6
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.2e-14 82.4 118 45.8
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 6.3e-14 80.9 84 50.0
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 3.5e-12 75.1 66 60.6
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.1e-10 70.1 44 65.9
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.5e-10 69.7 65 52.3
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 2.3e-08 62.4 41 68.3
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.3e-08 62.4 38 65.8
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 3.7e-06 55.1 56 46.4


User provided reference genes

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