Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 5.6e-161 570.9 283 100.0
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.1e-121 440.3 243 89.3
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 4.4e-105 385.2 246 80.1
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 4.0e-98 362.1 251 76.1
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.7e-93 346.7 249 71.5
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.3e-88 330.5 245 69.0
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 3.5e-86 322.4 245 67.3
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 5.9e-86 321.6 246 68.3
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.3e-85 319.7 246 67.5
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.5e-84 317.0 262 65.3
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 7.3e-84 314.7 261 65.5
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.3e-77 293.1 248 63.7
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.2e-75 287.3 268 58.6
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.1e-75 286.6 195 70.8
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 1.4e-74 283.9 270 58.1
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.8e-74 283.5 199 70.9
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 4.4e-73 278.9 192 70.3
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 5.8e-73 278.5 198 65.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 2.9e-72 276.2 208 64.9
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.9e-71 273.5 254 57.9
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 4.1e-71 272.3 248 56.9
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 2.1e-70 270.0 198 67.2
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.1e-70 270.0 251 56.6
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 2.1e-70 270.0 192 69.3
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 3.5e-70 269.2 195 69.7
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.5e-70 269.2 184 69.6
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.0e-69 267.7 164 76.2
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.0e-69 267.7 197 65.0
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.7e-69 266.9 200 67.0
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 3.9e-69 265.8 266 54.1
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 3.9e-69 265.8 194 69.6
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 3.9e-69 265.8 186 68.8
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 5.0e-69 265.4 195 69.7
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 5.0e-69 265.4 233 58.8
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 6.6e-69 265.0 162 76.5
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.1e-68 264.2 200 66.0
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.1e-68 264.2 227 59.5
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.5e-68 263.8 282 52.5
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 1.5e-68 263.8 211 60.2
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.9e-68 263.5 195 67.7
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.5e-68 263.1 253 55.7
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.5e-68 263.1 198 69.7
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 3.3e-68 262.7 208 62.5
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 5.6e-68 261.9 229 59.8
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 5.6e-68 261.9 198 63.6
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 9.5e-68 261.2 201 62.7
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 1.2e-67 260.8 209 60.3
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.6e-67 260.4 192 64.6
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.6e-67 260.4 239 56.1
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.1e-67 260.0 192 64.1
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.1e-67 260.0 252 55.6
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 3.6e-67 259.2 219 63.5
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.7e-67 258.8 202 64.4
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 6.2e-67 258.5 193 65.3
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 6.2e-67 258.5 252 54.0
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 1.1e-66 257.7 220 61.8
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.8e-66 256.9 193 68.4
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 2.3e-66 256.5 227 60.4
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 2.3e-66 256.5 220 61.8
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.3e-66 256.5 229 58.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 3.1e-66 256.1 209 60.8
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 8.9e-66 254.6 193 66.8
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.2e-65 254.2 201 60.7
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 2.0e-65 253.4 220 60.9
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.6e-65 253.1 193 67.4
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 4.4e-65 252.3 193 67.4
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 5.8e-65 251.9 190 65.3
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 7.5e-65 251.5 203 61.1
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 7.5e-65 251.5 196 62.8
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 9.9e-65 251.1 216 61.6
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 1.7e-64 250.4 190 65.3
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 6.4e-64 248.4 169 68.6
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 8.3e-64 248.1 192 62.0
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.1e-63 247.7 194 63.4
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.9e-63 246.9 194 64.9
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.4e-63 246.5 194 63.4
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 3.2e-63 246.1 194 63.4
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 7.1e-63 245.0 172 68.0
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.6e-62 243.8 194 60.8
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.1e-62 243.4 239 56.5
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 4.6e-62 242.3 192 64.6
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 2.3e-61 240.0 194 63.9
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.0e-61 239.6 285 48.8
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.9e-61 239.2 197 60.4
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 3.9e-61 239.2 157 69.4
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 5.1e-61 238.8 161 68.9
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 5.1e-61 238.8 255 49.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.1e-60 237.7 194 64.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.5e-60 237.3 162 67.9
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.5e-60 236.5 255 50.6
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.2e-59 234.2 238 50.8
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.6e-59 233.8 192 59.4
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.0e-58 229.2 260 50.8
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 6.8e-58 228.4 192 57.3
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 4.9e-56 222.2 199 57.8
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 6.0e-54 215.3 311 41.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.1e-50 204.5 119 77.3
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.8e-48 196.1 188 55.9
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 3.3e-44 183.0 198 44.9
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.4e-42 177.6 212 41.0
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 2.2e-40 170.2 182 44.5
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 3.2e-39 166.4 127 66.9
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 2.8e-35 153.3 181 47.0
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 2.2e-32 143.7 236 35.2
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 3.0e-29 133.3 168 39.9
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.9e-23 114.0 109 56.9
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.5e-23 112.5 83 63.9
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 9.3e-23 111.7 127 50.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 4.6e-22 109.4 204 34.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.6e-19 100.9 225 29.3
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-18 96.7 77 58.4
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 5.3e-18 95.9 140 36.4
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 5.7e-12 75.9 105 42.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 3.4e-09 66.6 94 42.6
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 2.2e-08 63.9 49 59.2
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 5.0e-08 62.8 32 84.4


User provided reference genes

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