Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 7.4e-101 370.5 188 100.0
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.4e-91 339.7 187 92.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 5.9e-82 307.8 192 84.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 7.7e-74 280.8 185 80.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.0e-73 280.4 193 77.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.6e-69 265.8 178 77.5
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 4.4e-69 265.0 179 77.1
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.2e-68 262.7 190 73.2
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.8e-67 259.6 173 78.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.0e-65 253.8 183 73.2
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.3e-65 253.4 187 71.7
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 1.1e-64 250.4 189 70.9
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.5e-64 249.2 182 71.4
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.2e-64 248.4 185 70.3
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 9.5e-64 247.3 187 70.6
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.2e-63 246.9 190 70.5
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.6e-63 246.5 191 71.2
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.8e-63 245.7 176 73.3
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 8.0e-63 244.2 175 73.1
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 8.0e-63 244.2 176 71.6
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.0e-62 243.8 191 68.6
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.4e-62 243.4 179 72.6
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 2.3e-62 242.7 181 71.3
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 2.3e-62 242.7 187 71.7
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.0e-62 242.3 176 72.2
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.0e-62 242.3 190 68.4
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 5.2e-62 241.5 168 75.6
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 8.8e-62 240.7 162 74.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.2e-61 240.4 176 71.6
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.5e-61 240.0 165 76.4
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.4e-61 238.8 187 66.3
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 5.7e-61 238.0 187 66.8
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 5.7e-61 238.0 183 68.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 5.7e-61 238.0 178 68.5
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 2.2e-60 236.1 183 67.8
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 2.2e-60 236.1 192 69.8
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.3e-60 234.6 190 65.8
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 8.3e-60 234.2 176 66.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.1e-59 233.8 193 66.3
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.4e-59 233.4 177 68.9
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.4e-59 233.4 178 70.8
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 3.1e-59 232.3 167 71.9
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 4.1e-59 231.9 188 67.6
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 5.4e-59 231.5 180 66.7
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.2e-58 230.3 164 72.6
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.6e-58 229.9 189 68.3
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 2.7e-58 229.2 177 70.6
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 4.5e-58 228.4 181 68.0
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 5.9e-58 228.0 166 74.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.7e-57 226.5 166 71.7
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 2.9e-57 225.7 187 67.4
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 3.8e-57 225.3 177 67.8
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.6e-57 224.6 179 67.0
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.5e-56 223.4 179 66.5
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-56 223.4 187 63.6
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-56 223.4 166 70.5
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.9e-56 223.0 159 74.2
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.9e-56 223.0 177 67.8
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 3.3e-56 222.2 168 69.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 4.3e-56 221.9 179 67.6
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 7.3e-56 221.1 174 67.2
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 7.3e-56 221.1 180 64.4
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 7.3e-56 221.1 184 65.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 9.5e-56 220.7 176 68.2
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.2e-55 220.3 159 73.6
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.1e-55 219.5 165 71.5
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 2.8e-55 219.2 178 62.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 3.6e-55 218.8 161 67.7
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.0e-54 217.2 178 63.5
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.4e-54 216.9 182 61.5
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.3e-54 216.1 163 66.9
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.0e-54 215.7 185 62.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 5.2e-54 214.9 173 64.2
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 4.4e-53 211.8 182 60.4
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.3e-52 210.3 144 75.0
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.2e-52 209.5 165 64.2
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.9e-52 208.4 175 60.6
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 4.9e-52 208.4 175 60.6
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 8.3e-52 207.6 182 59.3
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.1e-51 207.2 178 59.6
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.1e-51 207.2 178 59.6
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.4e-51 206.8 178 59.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.2e-50 203.8 241 49.8
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.5e-50 202.2 154 71.4
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.9e-50 201.4 185 58.9
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.7e-49 199.9 136 78.7
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 3.0e-49 199.1 163 63.2
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 3.0e-49 199.1 143 73.4
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 8.6e-49 197.6 176 61.4
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 3.6e-47 192.2 134 77.6
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 1.4e-46 190.3 136 74.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.7e-44 183.3 130 75.4
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.5e-40 170.2 118 73.7
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 4.3e-40 168.7 100 87.0
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 1.1e-38 164.1 168 54.2
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.0e-38 162.2 174 56.3
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 2.6e-37 159.5 180 52.8
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.9e-35 153.3 172 55.2
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.3e-33 146.4 167 49.7
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.6e-33 144.8 158 53.8
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 6.0e-26 121.7 160 47.5
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.1e-24 117.5 74 78.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.9e-24 116.7 83 69.9
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.6e-23 112.5 87 69.0
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-20 103.6 157 43.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 6.4e-20 101.7 73 67.1
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.9e-19 100.1 117 47.0
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.1e-18 96.7 171 32.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 6.0e-18 95.1 137 40.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.8e-14 83.6 68 61.8
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 2.8e-07 59.7 36 72.2
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.7e-07 59.3 73 49.3
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 3.1e-06 56.2 40 72.5


User provided reference genes

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