Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.9e-113 412.5 215 100.0
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 6.3e-104 380.9 217 92.2
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.0e-74 283.9 222 75.7
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.8e-71 273.1 225 70.2
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.7e-69 266.5 229 66.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.5e-68 263.5 223 69.5
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.6e-67 258.8 205 70.7
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 6.1e-67 258.1 224 65.6
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 6.1e-67 258.1 170 82.9
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.0e-66 255.4 195 74.4
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 5.2e-66 255.0 201 70.6
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 4.4e-65 251.9 213 67.1
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 5.7e-65 251.5 237 62.9
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.3e-64 250.4 220 66.8
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.7e-64 250.0 183 73.2
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.2e-64 249.6 226 64.2
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 3.7e-64 248.8 208 66.8
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.9e-64 248.4 220 66.4
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.9e-64 248.4 228 64.0
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 2.4e-63 246.1 190 72.1
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 3.1e-63 245.7 220 63.6
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.1e-63 245.4 220 65.9
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 7.0e-63 244.6 170 77.1
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 7.0e-63 244.6 217 64.5
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.6e-62 243.4 185 72.4
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.0e-62 243.0 208 64.9
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.7e-62 242.7 167 78.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 2.7e-62 242.7 181 71.8
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 4.5e-62 241.9 181 71.8
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 5.9e-62 241.5 195 68.7
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 5.9e-62 241.5 209 65.6
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.3e-61 240.4 171 76.0
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 1.3e-61 240.4 179 72.1
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.3e-61 240.4 173 72.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 2.9e-61 239.2 189 70.4
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 6.6e-61 238.0 189 68.3
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.6e-61 237.7 167 77.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 1.1e-60 237.3 171 76.0
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.9e-60 236.5 201 67.2
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.5e-60 236.1 179 72.1
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 2.5e-60 236.1 195 68.7
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.5e-60 236.1 182 72.0
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 3.3e-60 235.7 197 67.5
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 3.3e-60 235.7 179 70.9
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 4.3e-60 235.3 199 67.3
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 5.6e-60 235.0 197 67.5
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 9.5e-60 234.2 175 72.6
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.2e-59 233.8 171 74.3
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.6e-59 233.4 214 61.7
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.6e-59 233.4 184 70.1
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.1e-59 233.0 213 61.0
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.1e-59 233.0 185 69.2
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-59 232.6 195 66.2
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-59 232.6 195 67.7
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 3.6e-59 232.3 195 67.2
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 3.6e-59 232.3 173 74.0
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 4.7e-59 231.9 193 65.8
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.0e-58 230.7 192 66.1
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.4e-58 230.3 193 66.3
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.4e-58 230.3 189 67.7
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.3e-58 229.6 180 69.4
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 3.0e-58 229.2 182 70.9
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 4.0e-58 228.8 172 72.1
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 8.9e-58 227.6 189 66.7
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.2e-57 227.3 173 72.8
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.0e-57 226.5 171 70.2
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 4.4e-57 225.3 154 76.6
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 5.7e-57 224.9 171 71.3
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 9.8e-57 224.2 173 69.9
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.7e-56 223.4 174 71.8
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 1.7e-56 223.4 171 72.5
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.9e-56 222.6 196 63.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.9e-56 222.6 196 63.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 3.7e-56 222.2 171 70.8
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 4.9e-56 221.9 177 70.1
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 6.4e-56 221.5 229 59.8
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.8e-55 219.9 168 72.0
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 7.0e-55 218.0 207 61.4
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.2e-54 217.2 168 70.2
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.0e-54 216.5 178 68.0
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 2.0e-54 216.5 188 66.0
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 3.5e-54 215.7 168 70.2
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 7.8e-54 214.5 159 73.0
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 3.0e-53 212.6 173 68.2
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.9e-53 212.2 194 63.9
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 3.9e-53 212.2 168 66.1
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.9e-52 209.9 172 68.6
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 5.6e-52 208.4 127 81.9
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 9.5e-52 207.6 199 59.3
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.1e-51 206.5 181 64.6
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 8.0e-51 204.5 145 73.1
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 3.1e-50 202.6 147 72.8
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 4.0e-50 202.2 176 65.9
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.5e-49 200.3 164 69.5
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 1.7e-48 196.8 173 62.4
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-47 193.7 122 81.1
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-47 193.7 122 81.1
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.9e-47 193.4 149 70.5
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.9e-47 193.4 165 60.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 9.2e-47 191.0 135 73.3
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 1.6e-46 190.3 157 68.2
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.3e-45 187.2 240 50.4
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.9e-44 183.3 149 65.8
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 4.3e-44 182.2 183 58.5
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 9.5e-44 181.0 153 62.1
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 4.7e-43 178.7 257 45.1
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 8.1e-43 177.9 136 63.2
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 3.1e-42 176.0 162 59.3
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 3.0e-37 159.5 145 55.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.3e-36 155.6 89 92.1
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 2.6e-33 146.4 168 49.4
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 4.9e-32 142.1 108 73.1
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.9e-28 130.2 167 52.1
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 4.4e-25 119.0 119 58.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 8.4e-24 114.8 159 44.0
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 8.4e-24 114.8 98 56.1
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.2e-22 110.9 98 62.2
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.0e-21 107.8 154 40.9
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.3e-21 106.7 77 72.7
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 4.5e-17 92.4 71 70.4
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 7.1e-15 85.1 147 42.9


User provided reference genes

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