Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G290900 Phaseolus vulgaris HOM05D011327 ORTHO05D013488 4.7e-52 207.6 106 100.0
Glyma.02G310100 Glycine max HOM05D011327 ORTHO05D013488 6.6e-30 134.0 101 72.3
Glyma.14G002600 Glycine max HOM05D011327 ORTHO05D013488 8.6e-30 133.7 104 72.1
Lalb_Chr22g0360811 Lupinus albus HOM05D011327 ORTHO05D013488 4.6e-15 84.7 113 49.6
Lalb_Chr14g0362711 Lupinus albus HOM05D011327 ORTHO05D013488 1.3e-14 83.2 122 48.4
VMungo0540G1396 Vigna mungo HOM05D011327 ORTHO05D013488 1.7e-14 82.8 109 51.4
Medtr3g081210 Medicago truncatula HOM05D011327 ORTHO05D013488 3.0e-14 82.0 111 48.6
arahy.Tifrunner.gnm1.ann1.68BC0Z Arachis hypogaea HOM05D011327 ORTHO05D013488 2.5e-13 79.0 138 40.6
Lj6g0025708 Lotus japonicus HOM05D011327 ORTHO05D013488 5.6e-13 77.8 104 47.1
Phvul.006G001900 Phaseolus vulgaris HOM05D011327 ORTHO05D013488 7.3e-13 77.4 111 49.5
Glyma.20G065500 Glycine max HOM05D011327 ORTHO05D013488 6.2e-12 74.3 106 47.2
Lj6g0020629 Lotus japonicus HOM05D011327 ORTHO05D013488 1.1e-11 73.6 109 45.9
arahy.Tifrunner.gnm1.ann1.BN4LR6 Arachis hypogaea HOM05D011327 ORTHO05D013488 1.4e-11 73.2 87 49.4
Lj6g0014429 Lotus japonicus HOM05D011327 ORTHO05D013488 3.1e-11 72.0 109 45.0
Psat5g108040 Pisum sativum HOM05D011327 ORTHO05D013488 3.2e-08 62.0 109 41.3
TPR.G33559 Trifolium pratense HOM05D011327 ORTHO05D013488 4.1e-08 61.6 116 39.7
Psat0s2707g0200 Pisum sativum HOM05D011327 ORTHO05D013488 7.1e-08 60.8 96 43.8
Potri.006G023301 Populus trichocarpa HOM05D002924 ORTHO05D003122 9.2e-08 60.5 111 43.2
TAR488G0001 Trochodendron aralioides HOM05D002924 ORTHO05D003122 1.2e-07 60.1 110 40.9
TAR626G1845 Trochodendron aralioides HOM05D002924 ORTHO05D003122 7.8e-07 57.4 113 38.9
TAR626G0560 Trochodendron aralioides HOM05D002924 ORTHO05D003122 3.0e-06 55.5 125 37.6
MBI02_g15233_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.9e-06 55.1 111 37.8
PGR004G2368 Punica granatum HOM05D002924 ORTHO05D003122 3.9e-06 55.1 117 37.6
Sed0024828 Sechium edule HOM05D002924 ORTHO05D003122 3.9e-06 55.1 120 36.7
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 8.6e-06 53.9 113 39.8


User provided reference genes

Program Settings