Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.0e-68 262.3 131 100.0
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 4.3e-55 218.0 121 88.4
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 3.6e-54 214.9 116 93.1
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 3.6e-46 188.3 120 78.3
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 2.0e-44 182.6 121 77.7
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 9.9e-44 180.3 122 78.7
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 9.9e-44 180.3 122 78.7
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 6.4e-43 177.6 115 78.3
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 6.4e-43 177.6 118 78.8
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 8.7e-40 167.2 120 71.7
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.9e-39 166.0 122 71.3
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 4.8e-38 161.4 119 69.7
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.4e-37 159.8 119 69.7
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.8e-37 159.5 122 69.7
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 3.1e-37 158.7 127 67.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 5.3e-37 157.9 125 68.8
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 5.3e-37 157.9 118 70.3
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 9.0e-37 157.1 123 68.3
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.5e-36 156.4 114 69.3
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 2.0e-36 156.0 127 66.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.0e-36 156.0 120 69.2
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.6e-36 155.6 118 66.9
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.4e-36 155.2 116 65.5
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.4e-36 154.8 127 66.9
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.4e-36 154.8 122 65.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 4.4e-36 154.8 119 67.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 5.8e-36 154.5 127 66.1
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 7.6e-36 154.1 127 66.1
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 7.6e-36 154.1 118 66.9
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 9.9e-36 153.7 133 63.9
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 9.9e-36 153.7 121 67.8
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.9e-36 153.7 121 67.8
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.9e-36 153.7 121 67.8
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.9e-36 153.7 121 67.8
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.7e-35 152.9 121 67.8
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.2e-35 152.5 128 66.4
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.9e-35 152.1 128 64.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 3.8e-35 151.8 120 67.5
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 3.8e-35 151.8 120 67.5
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 4.9e-35 151.4 121 67.8
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 6.4e-35 151.0 131 64.1
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 6.4e-35 151.0 125 64.8
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.4e-34 149.8 120 67.5
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.9e-34 149.4 121 68.6
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.9e-34 149.4 122 67.2
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.4e-34 149.1 128 64.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 3.2e-34 148.7 119 67.2
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 4.2e-34 148.3 116 64.7
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 7.1e-34 147.5 120 65.0
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 7.1e-34 147.5 122 65.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.6e-33 146.4 117 65.8
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.6e-33 146.4 78 89.7
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.6e-33 146.4 118 66.1
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.1e-33 146.0 121 66.1
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 2.1e-33 146.0 122 68.0
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 2.7e-33 145.6 125 65.6
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.7e-33 145.6 126 65.9
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.7e-33 145.6 122 68.0
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 3.5e-33 145.2 116 66.4
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 4.6e-33 144.8 122 65.6
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 6.0e-33 144.4 127 63.0
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 7.9e-33 144.1 115 64.3
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.0e-32 143.7 120 67.5
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.3e-32 143.3 120 67.5
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 1.7e-32 142.9 124 62.9
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.3e-32 142.5 124 62.9
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 3.0e-32 142.1 96 75.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 3.9e-32 141.7 122 65.6
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 3.9e-32 141.7 116 63.8
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 5.1e-32 141.4 122 64.8
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.1e-31 140.2 120 60.8
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.5e-31 139.8 91 76.9
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.5e-31 139.8 116 62.9
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.9e-31 139.4 120 61.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 3.3e-31 138.7 98 73.5
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 7.4e-31 137.5 126 60.3
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 7.4e-31 137.5 73 89.0
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.3e-30 136.7 123 61.0
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 3.6e-30 135.2 78 83.3
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 4.8e-30 134.8 162 46.3
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 8.1e-30 134.0 92 75.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 2.4e-29 132.5 79 81.0
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 3.1e-29 132.1 78 80.8
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 9.0e-29 130.6 74 86.5
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.5e-28 129.8 67 89.6
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 9.9e-28 127.1 75 86.7
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.9e-27 125.6 66 87.9
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 6.4e-27 124.4 69 82.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.0e-25 117.9 76 72.4
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 3.3e-23 112.1 72 77.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 9.6e-23 110.5 71 70.4
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.4e-21 106.7 70 67.1
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 2.6e-20 102.4 48 95.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.4e-20 102.1 49 95.9
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.9e-15 86.3 70 57.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 1.9e-15 86.3 58 67.2
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 3.7e-14 82.0 52 65.4
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.4e-10 70.1 100 40.0
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 1.3e-06 57.0 83 47.0
MCO03G370 Micromonas commoda HOM05D007442 ORTHO05D009284 3.7e-06 55.5 73 45.2


User provided reference genes

Program Settings