Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 6.6e-90 334.0 162 100.0
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.3e-81 305.1 162 90.7
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 2.1e-75 285.8 164 84.8
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.6e-70 268.9 163 78.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.4e-68 263.1 151 81.5
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.6e-67 259.6 162 74.7
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 3.8e-61 238.4 143 81.8
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 3.8e-61 238.4 160 71.2
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 3.8e-61 238.4 160 72.5
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.1e-60 236.9 160 70.6
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 7.1e-60 234.2 164 67.1
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.6e-59 233.0 158 70.9
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.7e-59 232.3 156 69.9
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.3e-58 229.9 165 69.1
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.3e-58 229.2 158 69.6
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.3e-58 229.2 148 74.3
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 3.3e-57 225.3 148 72.3
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 3.3e-57 225.3 164 67.1
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 3.3e-57 225.3 161 65.8
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 2.8e-56 222.2 170 65.9
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 2.8e-56 222.2 159 66.7
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 4.8e-56 221.5 159 66.0
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.8e-56 221.5 159 66.7
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.4e-55 219.2 143 72.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 3.1e-55 218.8 157 63.7
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 4.1e-55 218.4 163 69.3
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 5.3e-55 218.0 150 71.3
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 5.3e-55 218.0 156 66.7
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 9.0e-55 217.2 166 65.1
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.5e-54 216.5 159 66.7
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 4.5e-54 214.9 148 68.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 7.6e-54 214.2 160 65.0
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.3e-53 213.4 139 71.2
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.7e-53 213.0 162 65.4
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.8e-53 211.8 164 65.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 3.8e-53 211.8 163 66.3
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 3.8e-53 211.8 147 67.3
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 8.4e-53 210.7 146 69.2
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.4e-52 209.9 149 65.8
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.5e-52 209.1 165 63.6
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.5e-52 209.1 146 68.5
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.2e-52 208.8 154 65.6
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.2e-52 208.4 145 65.5
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.2e-52 208.4 148 67.6
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.2e-51 206.8 161 64.0
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 2.1e-51 206.1 160 61.9
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.1e-51 204.5 154 63.6
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.1e-51 204.5 154 63.6
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.1e-51 204.5 154 63.6
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 6.1e-51 204.5 153 63.4
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 3.9e-50 201.8 151 62.9
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 1.1e-49 200.3 133 68.4
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.5e-49 199.9 230 49.1
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 2.2e-48 196.1 147 62.6
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.8e-48 195.7 147 61.9
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.8e-48 195.7 147 61.9
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 3.7e-48 195.3 148 59.5
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 4.8e-48 194.9 132 68.2
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 4.8e-48 194.9 147 65.3
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 6.3e-48 194.5 214 51.9
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.1e-47 193.7 147 60.5
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.4e-47 193.4 160 58.1
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.4e-47 192.6 144 66.0
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 3.1e-47 192.2 145 62.8
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 6.9e-47 191.0 145 61.4
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 9.0e-47 190.7 144 63.2
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.0e-46 189.5 153 56.2
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 3.4e-46 188.7 158 55.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.0e-45 187.2 137 62.0
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.3e-45 186.8 145 57.9
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 2.5e-44 182.6 151 60.3
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 3.2e-44 182.2 135 63.7
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.2e-43 180.3 149 57.7
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-41 173.3 141 56.7
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 3.3e-41 172.2 134 59.7
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 4.3e-41 171.8 134 59.0
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 5.7e-41 171.4 134 59.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 5.7e-41 171.4 141 56.7
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 3.7e-40 168.7 134 57.5
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.7e-40 168.7 147 55.8
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 5.3e-39 164.9 145 52.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-38 163.3 125 60.8
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 5.0e-37 158.3 152 55.3
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 6.5e-37 157.9 135 55.6
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.1e-36 157.1 110 70.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 2.7e-35 152.5 152 52.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 7.9e-35 151.0 129 56.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.5e-33 146.7 145 49.0
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.5e-33 146.7 100 71.0
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.2e-32 142.9 132 52.3
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.0e-29 131.7 118 58.5
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.9e-28 129.8 119 55.5
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.2e-27 127.1 86 70.9
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 4.7e-27 125.2 88 64.8
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 6.1e-27 124.8 88 70.5
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-25 120.6 91 65.9
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 4.4e-25 118.6 84 69.0
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 3.7e-24 115.5 80 66.2
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 3.7e-24 115.5 147 40.1
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 4.8e-24 115.2 73 75.3
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 8.2e-24 114.4 88 59.1
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.4e-23 112.8 116 52.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.2e-22 110.5 152 38.8
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.7e-22 109.4 134 44.8
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 4.5e-22 108.6 91 47.3
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.5e-20 102.8 72 62.5
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.1e-19 98.2 68 72.1
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-14 83.6 44 88.6
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 1.0e-10 70.9 60 60.0
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 8.8e-10 67.8 71 46.5


User provided reference genes

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