Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 2.2e-114 415.6 207 100.0
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 4.0e-100 368.2 207 87.0
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 5.9e-83 311.2 206 76.7
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 5.3e-76 288.1 219 68.5
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 5.3e-76 288.1 220 67.3
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 1.5e-75 286.6 224 67.0
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 3.2e-73 278.9 220 68.6
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 9.4e-73 277.3 220 65.5
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 3.9e-71 271.9 218 66.1
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 7.4e-70 267.7 223 66.4
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 7.4e-70 267.7 221 65.2
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 7.4e-70 267.7 217 63.6
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 7.4e-70 267.7 217 65.4
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 3.7e-69 265.4 221 61.1
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 6.3e-69 264.6 221 62.0
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 1.8e-68 263.1 221 59.7
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 2.4e-68 262.7 216 63.9
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 9.1e-68 260.8 221 61.1
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 1.6e-67 260.0 222 62.6
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 2.0e-67 259.6 220 61.4
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 2.0e-67 259.6 221 59.7
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 3.5e-67 258.8 221 62.9
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 3.5e-67 258.8 222 60.4
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 4.5e-67 258.5 221 60.6
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 4.5e-67 258.5 226 62.4
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 7.7e-67 257.7 223 61.0
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 1.0e-66 257.3 219 60.7
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 2.9e-66 255.8 221 59.7
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 3.8e-66 255.4 221 59.7
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 5.0e-66 255.0 224 58.5
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 5.0e-66 255.0 223 59.2
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 6.5e-66 254.6 223 59.6
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 6.5e-66 254.6 223 59.6
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 8.5e-66 254.2 221 62.0
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 8.5e-66 254.2 223 58.7
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 8.5e-66 254.2 214 61.7
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 1.1e-65 253.8 216 63.0
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 1.5e-65 253.4 217 59.9
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 2.5e-65 252.7 220 61.4
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 3.2e-65 252.3 213 61.5
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 3.2e-65 252.3 213 61.5
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 3.2e-65 252.3 223 60.5
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 4.2e-65 251.9 212 61.3
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 7.2e-65 251.1 224 62.1
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 9.4e-65 250.8 218 60.6
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 1.2e-64 250.4 219 60.3
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 1.6e-64 250.0 217 60.4
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 2.1e-64 249.6 219 61.2
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 2.7e-64 249.2 207 64.3
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 2.7e-64 249.2 207 64.3
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 3.6e-64 248.8 222 59.0
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 3.6e-64 248.8 217 59.9
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 4.7e-64 248.4 217 59.9
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 6.1e-64 248.1 211 59.7
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 6.1e-64 248.1 211 62.1
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 8.0e-64 247.7 217 59.9
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 1.0e-63 247.3 211 63.5
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 1.4e-63 246.9 210 60.5
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 1.8e-63 246.5 211 62.6
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 3.0e-63 245.7 213 57.7
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 4.0e-63 245.4 224 57.1
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 4.0e-63 245.4 209 58.9
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 4.0e-63 245.4 208 59.1
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 5.2e-63 245.0 223 59.6
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 8.8e-63 244.2 209 58.9
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 1.5e-62 243.4 218 61.0
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 7.5e-62 241.1 214 59.8
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 7.5e-62 241.1 219 61.2
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 9.7e-62 240.7 210 59.0
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 9.7e-62 240.7 214 59.3
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 2.2e-61 239.6 222 56.8
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 3.7e-61 238.8 215 57.2
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 6.3e-61 238.0 209 62.7
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 6.3e-61 238.0 226 56.6
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 8.2e-61 237.7 205 61.0
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 1.1e-60 237.3 210 57.6
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 1.1e-60 237.3 214 58.4
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 1.4e-60 236.9 233 57.5
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 2.4e-60 236.1 211 57.8
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 2.4e-60 236.1 209 57.4
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 4.1e-60 235.3 202 57.9
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 4.1e-60 235.3 218 55.0
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 5.3e-60 235.0 211 57.8
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 9.1e-60 234.2 201 58.7
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.2e-59 233.8 220 56.4
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 1.2e-59 233.8 218 57.8
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 1.6e-59 233.4 203 61.1
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 2.7e-59 232.6 212 58.0
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 3.5e-59 232.3 206 56.8
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 5.9e-59 231.5 218 58.3
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 5.9e-59 231.5 207 55.1
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 5.9e-59 231.5 210 57.6
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 1.3e-58 230.3 148 73.0
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 1.7e-58 229.9 216 57.9
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 1.7e-58 229.9 202 59.9
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 2.2e-58 229.6 205 57.6
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 3.8e-58 228.8 215 57.2
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 5.0e-58 228.4 217 56.2
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 8.5e-58 227.6 203 62.6
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.1e-57 227.3 217 55.8
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 1.1e-57 227.3 231 54.5
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 7.2e-57 224.6 167 67.7
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 7.2e-57 224.6 150 71.3
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 1.2e-56 223.8 216 55.6
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 1.6e-56 223.4 210 55.2
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 1.6e-56 223.4 210 57.1
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 2.1e-56 223.0 214 56.5
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 2.7e-56 222.6 210 56.7
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 6.1e-56 221.5 210 56.7
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 6.1e-56 221.5 210 56.7
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 6.1e-56 221.5 194 59.3
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 6.1e-56 221.5 215 54.0
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 6.8e-55 218.0 218 54.1
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 2.0e-54 216.5 223 51.6
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 3.4e-54 215.7 223 52.0
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 5.7e-54 214.9 221 52.5
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 7.5e-54 214.5 216 56.9
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 7.5e-54 214.5 143 67.8
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 9.8e-54 214.2 209 57.4
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 1.3e-53 213.8 208 54.8
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 1.3e-53 213.8 142 70.4
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 2.2e-53 213.0 232 50.0
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 2.2e-53 213.0 224 53.1
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 2.2e-53 213.0 133 73.7
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 2.8e-53 212.6 214 54.7
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 2.8e-53 212.6 142 69.7
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 2.4e-52 209.5 213 54.9
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 7.0e-52 208.0 213 53.5
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 7.0e-52 208.0 237 49.8
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 9.1e-52 207.6 196 53.6
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 2.7e-51 206.1 206 51.9
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 1.0e-50 204.1 210 54.3
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 1.7e-50 203.4 176 57.4
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 2.5e-49 199.5 143 64.3
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 2.5e-49 199.5 233 48.9
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 4.2e-49 198.7 211 53.6
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 9.5e-49 197.6 195 54.4
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.8e-48 196.1 197 53.8
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 2.8e-48 196.1 222 50.5
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 3.6e-48 195.7 146 59.6
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 4.7e-48 195.3 139 61.9
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 6.1e-48 194.9 183 55.2
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 8.0e-48 194.5 221 48.0
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 1.0e-47 194.1 208 55.3
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 1.4e-47 193.7 215 50.7
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 1.2e-46 190.7 206 49.5
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 5.7e-46 188.3 215 49.3
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 5.7e-46 188.3 215 49.3
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.7e-45 186.8 203 49.3
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 1.7e-45 186.8 125 70.4
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 1.4e-44 183.7 188 54.3
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 2.4e-44 183.0 186 54.3
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 1.2e-43 180.6 221 47.5
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 4.5e-43 178.7 212 51.9
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 1.3e-42 177.2 215 44.7
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.3e-42 176.4 215 46.0
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 1.9e-41 173.3 122 65.6
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 4.3e-41 172.2 125 62.4
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 5.6e-41 171.8 214 46.7
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 7.3e-41 171.4 141 60.3
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 2.8e-40 169.5 218 45.0
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 3.6e-40 169.1 211 46.0
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 3.4e-38 162.5 132 56.8
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 9.8e-38 161.0 212 48.1
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 4.9e-37 158.7 122 59.8
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 9.2e-36 154.5 108 63.9
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 2.7e-35 152.9 117 58.1
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 7.3e-33 144.8 264 36.4
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 8.0e-32 141.4 146 50.7
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.4e-31 140.6 86 75.6
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 3.1e-31 139.4 77 81.8
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 1.7e-29 133.7 205 42.0
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 1.6e-27 127.1 221 39.8
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 1.6e-27 127.1 221 39.8
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 1.8e-23 113.6 214 39.3
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 1.7e-21 107.1 58 82.8
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 1.5e-17 94.0 49 83.7
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 3.6e-16 89.4 52 78.8
CSS0045152 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 2.6e-06 56.6 110 39.1


User provided reference genes

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