Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 5.5e-181 637.5 318 100.0
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.5e-149 533.1 377 74.8
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 5.4e-144 514.6 329 79.6
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.7e-142 509.6 318 80.5
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.5e-117 426.8 316 69.0
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 1.9e-109 399.8 318 66.4
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.0e-106 389.8 323 65.9
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 2.9e-105 386.0 321 65.1
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 4.6e-103 378.6 253 75.1
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 5.3e-99 365.2 325 61.5
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 8.7e-94 347.8 362 54.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 3.8e-89 332.4 321 59.5
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 2.0e-69 266.9 318 50.9
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 2.4e-67 260.0 320 48.8
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.3e-67 258.8 319 48.3
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.2e-66 257.7 318 47.5
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.4e-66 256.1 327 47.4
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 7.7e-66 255.0 331 47.4
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.0e-65 254.6 318 47.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.0e-65 254.6 320 48.1
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.0e-65 254.6 329 48.0
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 3.8e-65 252.7 336 47.9
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.2e-63 247.7 329 45.9
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-63 247.3 333 45.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 2.7e-63 246.5 330 44.8
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 4.7e-63 245.7 379 42.2
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.4e-62 244.2 331 45.6
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 2.0e-61 240.4 284 49.3
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.7e-60 237.3 193 62.2
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.2e-60 236.9 345 44.3
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 6.3e-60 235.3 331 45.0
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 8.2e-60 235.0 314 45.5
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 1.1e-59 234.6 190 63.7
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.1e-59 234.6 332 43.7
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 7.0e-59 231.9 190 60.0
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 2.0e-58 230.3 339 41.9
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 4.5e-58 229.2 190 59.5
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.9e-57 226.5 315 43.8
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 3.8e-57 226.1 213 56.3
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 6.5e-57 225.3 354 43.5
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.1e-56 224.6 175 63.4
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 5.5e-56 222.2 315 43.2
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.2e-56 221.9 220 55.5
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.6e-55 220.7 321 45.5
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.7e-55 219.2 192 60.9
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.7e-55 219.2 350 42.3
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 4.7e-55 219.2 286 45.5
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 8.0e-55 218.4 310 42.6
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.3e-54 216.9 247 51.8
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 3.0e-54 216.5 334 41.0
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 6.7e-54 215.3 322 41.9
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 8.8e-54 214.9 178 60.1
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.1e-53 214.5 321 44.2
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 2.0e-53 213.8 317 42.9
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 4.4e-53 212.6 199 56.3
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 5.7e-53 212.2 169 63.3
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 1.3e-52 211.1 293 42.7
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.7e-52 210.7 209 51.7
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 4.8e-52 209.1 338 42.3
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 6.3e-52 208.8 167 61.7
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.8e-51 207.2 199 54.3
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 3.1e-51 206.5 291 43.0
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 4.1e-51 206.1 354 40.7
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 4.1e-51 206.1 162 62.3
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 2.0e-50 203.8 164 61.6
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 3.5e-50 203.0 204 52.5
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 7.7e-50 201.8 161 62.1
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 2.2e-49 200.3 312 41.0
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 6.5e-49 198.7 335 42.1
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 8.5e-49 198.4 221 45.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 2.5e-48 196.8 188 53.7
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.5e-48 196.8 174 54.0
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 2.5e-48 196.8 212 53.8
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.5e-48 196.8 202 50.5
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 2.5e-48 196.8 165 58.8
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.2e-48 196.4 204 55.4
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.2e-48 196.4 198 53.5
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 3.2e-48 196.4 168 54.2
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 5.5e-48 195.7 330 36.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 9.4e-48 194.9 174 53.4
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 9.4e-48 194.9 174 53.4
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.6e-47 194.1 168 53.6
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 2.1e-47 193.7 225 45.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.7e-47 193.4 236 43.6
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 2.7e-47 193.4 225 43.1
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 2.7e-47 193.4 174 52.9
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 3.6e-47 193.0 333 36.0
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 4.7e-47 192.6 208 48.6
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 6.1e-47 192.2 174 52.3
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 1.4e-46 191.0 204 48.5
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.0e-46 189.5 332 38.0
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 6.7e-46 188.7 207 49.8
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 2.0e-45 187.2 190 55.3
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 3.3e-45 186.4 191 48.7
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 2.4e-43 180.3 184 50.0
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 5.3e-43 179.1 168 50.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 3.5e-42 176.4 119 70.6
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.7e-41 174.1 263 41.1
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 6.3e-36 155.6 158 55.7
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.1e-35 154.8 240 45.0
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 7.2e-32 142.1 213 35.2
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.5e-29 134.4 118 53.4
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.7e-26 123.6 120 49.2
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.1e-24 118.2 160 38.1
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 2.6e-21 107.1 234 37.2
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 7.5e-21 105.5 207 30.4
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 4.4e-13 79.7 189 26.5
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.9e-11 74.3 216 32.4
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.2e-10 71.6 61 49.2
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 3.1e-06 57.0 68 45.6


User provided reference genes

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