Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G281200 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 2.9e-48 194.9 99 100.0
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 4.1e-18 94.7 105 57.1
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 6.4e-11 70.9 102 48.0
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 3.2e-10 68.6 89 50.6
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 7.1e-10 67.4 92 44.6
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 2.7e-09 65.5 82 50.0
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 3.5e-09 65.1 107 42.1
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 2.3e-08 62.4 76 47.4
MELO3C024968.2 Cucumis melo HOM05D006736 ORTHO05D008459 3.0e-08 62.0 79 46.8
ATR0751G116 Amborella trichopoda HOM05D006736 ORTHO05D008459 5.1e-08 61.2 60 53.3
Cfa021889 Carpinus fangiana HOM05D006736 ORTHO05D008459 5.1e-08 61.2 81 43.2
Potri.001G371400 Populus trichocarpa HOM05D006736 ORTHO05D008459 6.6e-08 60.8 82 48.8
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 6.6e-08 60.8 91 38.5
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 1.9e-07 59.3 91 44.0
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 1.9e-07 59.3 80 47.5
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 2.5e-07 58.9 94 42.6
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 3.3e-07 58.5 84 41.7
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 3.3e-07 58.5 68 48.5
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 4.3e-07 58.2 72 44.4
CiPaw.11G206800 Carya illinoinensis HOM05D006736 ORTHO05D008459 5.6e-07 57.8 93 44.1
MELO3C014070.2 Cucumis melo HOM05D006736 ORTHO05D008459 7.3e-07 57.4 63 54.0
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 9.5e-07 57.0 71 46.5
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 9.5e-07 57.0 99 45.5
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 9.5e-07 57.0 81 48.1
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 1.2e-06 56.6 85 37.6
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 1.2e-06 56.6 67 46.3
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 1.6e-06 56.2 95 44.2
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 1.6e-06 56.2 83 38.6
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 1.6e-06 56.2 88 44.3
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 2.1e-06 55.8 56 57.1
FvH4_3g42280 Fragaria vesca HOM05D006736 ORTHO05D008459 2.1e-06 55.8 89 42.7
FAN11G0661 Fragaria x ananassa HOM05D006736 ORTHO05D008459 2.1e-06 55.8 89 42.7
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 2.1e-06 55.8 89 42.7
FAN25G3397 Fragaria x ananassa HOM05D006736 ORTHO05D008459 2.1e-06 55.8 89 42.7
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 2.1e-06 55.8 64 51.6
ClCG10G003900 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.8e-06 55.5 63 50.8
ClCG10G004060 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.8e-06 55.5 63 50.8
Ciclev10010675m.g Citrus clementina HOM05D006736 ORTHO05D008459 2.8e-06 55.5 56 57.1
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 2.8e-06 55.5 94 42.6
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 2.8e-06 55.5 62 45.2
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 2.8e-06 55.5 101 40.6
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 3.6e-06 55.1 91 39.6
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 3.6e-06 55.1 77 36.4
Thecc.07G008000 Theobroma cacao HOM05D006736 ORTHO05D008459 3.6e-06 55.1 97 40.2
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 4.7e-06 54.7 79 43.0
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 4.7e-06 54.7 76 40.8
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 6.2e-06 54.3 99 41.4
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 6.2e-06 54.3 70 45.7
CSS0024852 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 8.1e-06 53.9 81 38.3


User provided reference genes

Program Settings