Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 1.6e-127 459.5 241 100.0
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 9.9e-82 307.4 260 71.5
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 4.9e-73 278.5 256 67.6
VMungo0647G1046 Vigna mungo HOM05D014115 ORTHO05D004704 1.5e-69 266.9 238 68.1
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 1.1e-37 161.0 268 48.5
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 6.7e-30 135.2 288 38.9
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 7.7e-26 121.7 263 39.5
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 1.0e-25 121.3 214 44.4
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 6.1e-23 112.1 262 39.7
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 1.5e-21 107.5 298 35.2
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 1.3e-20 104.4 215 42.8
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 3.7e-20 102.8 294 35.7
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 3.2e-16 89.7 257 37.0
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 2.3e-14 83.6 212 36.8
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 1.2e-13 81.3 222 35.6
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 1.2e-13 81.3 222 35.6
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 1.5e-13 80.9 121 48.8
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 9.7e-13 78.2 311 30.9
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 1.3e-12 77.8 314 30.6
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 6.3e-12 75.5 223 32.7
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 2.0e-10 70.5 118 38.1
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 2.0e-10 70.5 250 32.0
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 3.5e-10 69.7 112 45.5
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 4.5e-10 69.3 121 38.8
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 7.7e-10 68.6 245 30.6
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 7.7e-10 68.6 118 37.3
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.0e-09 68.2 254 29.1
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.0e-09 68.2 125 39.2
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.3e-09 67.8 249 31.3
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 1.7e-09 67.4 85 45.9
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 3.8e-09 66.2 83 45.8
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 5.0e-09 65.9 231 29.9
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 8.5e-09 65.1 96 42.7
Nn1g04368 Nelumbo nucifera HOM05D005849 ORTHO05D004704 8.5e-09 65.1 68 52.9
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 1.1e-08 64.7 232 28.4
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 1.9e-08 63.9 248 30.6
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 7.2e-08 62.0 130 36.2
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 7.2e-08 62.0 128 35.2
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.6e-07 60.8 245 27.8
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.6e-07 60.8 96 41.7
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 1.6e-07 60.8 70 50.0
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 2.1e-07 60.5 80 40.0
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 2.1e-07 60.5 245 27.8
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 3.6e-07 59.7 243 29.6
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 4.7e-07 59.3 255 27.5
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 4.7e-07 59.3 255 31.0
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 6.1e-07 58.9 254 28.7
Lj1P796T11 Lonicera japonica HOM05D005849 ORTHO05D004704 6.1e-07 58.9 70 51.4
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 8.0e-07 58.5 101 37.6
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.0e-06 58.2 239 31.0
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 1.4e-06 57.8 217 30.4
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 1.4e-06 57.8 232 28.0
Ca_22134_v3 Cicer arietinum L. HOM05D014115 ORTHO05D004704 1.8e-06 57.4 249 30.1
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 1.8e-06 57.4 231 30.7
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 1.8e-06 57.4 253 27.3
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.3e-06 57.0 231 30.7
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 3.0e-06 56.6 141 31.9
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 4.0e-06 56.2 128 35.2
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 5.2e-06 55.8 231 29.9
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 5.2e-06 55.8 85 41.2
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 5.2e-06 55.8 209 31.6
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 6.8e-06 55.5 222 31.5
ClCG09G021280 Citrullus lanatus HOM05D031229 ORTHO05D029008 8.8e-06 55.1 77 45.5


User provided reference genes

Program Settings