Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.5e-71 272.7 138 100.0
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 5.7e-66 254.2 138 94.9
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 5.1e-59 231.1 138 85.5
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 1.1e-56 223.4 139 83.5
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 1.8e-56 222.6 143 80.4
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 1.8e-56 222.6 143 80.4
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 1.0e-54 216.9 144 79.9
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 4.7e-52 208.0 144 77.1
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 3.3e-50 201.8 136 78.7
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 3.7e-49 198.4 136 77.2
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 4.8e-49 198.0 133 78.2
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 1.4e-48 196.4 133 75.9
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 7.0e-48 194.1 141 68.8
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 7.7e-47 190.7 135 71.1
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 1.0e-46 190.3 127 73.2
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.7e-46 189.5 142 66.9
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 1.9e-45 186.0 143 72.7
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 2.5e-45 185.7 141 66.7
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 3.2e-45 185.3 146 69.9
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 4.2e-45 184.9 136 67.6
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 4.2e-45 184.9 144 67.4
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 2.7e-44 182.2 142 67.6
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 8.0e-44 180.6 142 66.9
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.0e-43 180.3 143 67.1
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.4e-43 179.9 147 64.6
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.4e-43 179.9 145 66.2
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 3.0e-43 178.7 141 68.8
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 4.0e-43 178.3 145 66.9
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 4.0e-43 178.3 145 66.9
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 4.0e-43 178.3 142 67.6
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 5.2e-43 177.9 142 67.6
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 5.2e-43 177.9 130 73.1
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 5.2e-43 177.9 129 72.1
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 6.8e-43 177.6 142 67.6
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 6.8e-43 177.6 128 73.4
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 8.8e-43 177.2 142 62.7
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 8.8e-43 177.2 135 68.9
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.6e-42 175.6 140 67.9
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.4e-42 174.9 139 64.7
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 5.7e-42 174.5 129 69.8
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 1.3e-41 173.3 130 70.8
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 1.3e-41 173.3 127 69.3
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.7e-41 172.9 143 62.9
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.7e-41 172.9 143 62.9
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 1.7e-41 172.9 142 66.2
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.7e-41 172.9 146 62.3
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 6.3e-41 171.0 145 64.1
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 6.3e-41 171.0 136 68.4
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 8.3e-41 170.6 127 70.9
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 1.1e-40 170.2 142 64.1
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.4e-40 169.9 141 65.2
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.4e-40 169.1 142 64.1
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.4e-40 169.1 143 61.5
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 2.4e-40 169.1 141 61.7
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 4.1e-40 168.3 123 71.5
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 4.1e-40 168.3 141 65.2
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 5.4e-40 167.9 123 69.9
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 5.4e-40 167.9 142 66.2
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 5.4e-40 167.9 138 64.5
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 1.2e-39 166.8 140 65.0
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 1.6e-39 166.4 141 64.5
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 1.6e-39 166.4 139 64.0
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 4.5e-39 164.9 129 65.9
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 5.9e-39 164.5 141 66.7
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 5.9e-39 164.5 130 64.6
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 7.7e-39 164.1 144 63.9
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 7.7e-39 164.1 127 66.1
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 1.0e-38 163.7 139 63.3
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 1.0e-38 163.7 140 65.0
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 5.0e-38 161.4 123 67.5
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 6.5e-38 161.0 124 69.4
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 2.5e-37 159.1 130 64.6
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 2.5e-37 159.1 143 62.2
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 4.2e-37 158.3 123 66.7
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 4.2e-37 158.3 131 66.4
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 4.2e-37 158.3 128 65.6
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 5.5e-37 157.9 130 62.3
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 9.4e-37 157.1 143 64.3
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 9.4e-37 157.1 143 58.0
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.1e-36 156.0 131 66.4
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 2.7e-36 155.6 129 63.6
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 3.6e-36 155.2 131 62.6
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 8.0e-36 154.1 134 58.2
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 8.0e-36 154.1 145 60.0
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 8.0e-36 154.1 143 62.2
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 8.0e-36 154.1 129 62.8
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.8e-35 152.9 129 65.1
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.3e-35 152.5 131 65.6
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 2.3e-35 152.5 135 57.8
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 5.2e-35 151.4 144 60.4
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 2.6e-34 149.1 144 59.7
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 1.7e-33 146.4 129 60.5
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 4.9e-33 144.8 133 59.4
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 6.3e-33 144.4 140 57.9
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 8.3e-33 144.1 130 60.8
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 3.1e-32 142.1 91 79.1
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 7.0e-32 141.0 139 56.8
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 2.0e-31 139.4 127 55.9
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 2.7e-31 139.0 122 58.2
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 2.9e-30 135.6 135 58.5
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 3.8e-30 135.2 128 58.6
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 8.6e-30 134.0 127 56.7
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 1.5e-29 133.3 135 58.5
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 1.5e-29 133.3 135 58.5
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 1.9e-29 132.9 133 57.1
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 2.5e-29 132.5 98 75.5
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 9.5e-29 130.6 126 60.3
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 1.2e-28 130.2 131 57.3
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.6e-28 129.8 108 67.6
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 8.0e-28 127.5 134 56.7
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 1.0e-27 127.1 126 57.9
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 3.0e-27 125.6 134 56.7
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 3.0e-27 125.6 123 53.7
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 6.3e-25 117.9 141 50.4
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 8.3e-25 117.5 121 55.4
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 7.0e-24 114.4 123 54.5
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 9.2e-24 114.0 137 46.0
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.0e-23 112.8 127 55.9
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 1.7e-22 109.8 90 66.7
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 2.3e-22 109.4 122 50.0
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 2.9e-22 109.0 146 46.6
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.5e-21 105.9 134 44.8
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 1.8e-19 99.8 131 45.0
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 7.5e-18 94.4 142 42.3
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 1.2e-15 87.0 103 56.3
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 3.0e-14 82.4 103 53.4
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 1.9e-13 79.7 55 69.1
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 1.8e-11 73.2 94 50.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 2.9e-09 65.9 91 50.5
AagrBONN_evm.TU.Sc2ySwM_340.382 Anthoceros agrestis HOM05D005924 ORTHO05D007290 1.2e-07 60.5 143 33.6
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 2.1e-07 59.7 43 67.4
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 2.1e-07 59.7 105 40.0
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 8.6e-06 54.3 88 40.9


User provided reference genes

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