Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 2.8e-118 428.7 233 100.0
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 1.9e-85 319.7 244 76.6
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 1.6e-73 280.0 248 67.7
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 2.1e-73 279.6 252 68.3
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 7.9e-52 208.0 253 53.0
Lj6g0021470 Lotus japonicus HOM05D005871 ORTHO05D003654 3.4e-47 192.6 259 53.7
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 1.0e-43 181.0 253 51.8
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 8.7e-43 177.9 246 52.0
Medtr5g095630 Medicago truncatula HOM05D005871 ORTHO05D003654 8.7e-43 177.9 244 51.2
Medtr5g095540 Medicago truncatula HOM05D005871 ORTHO05D003654 2.2e-41 173.3 272 46.7
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 5.3e-40 168.7 253 49.0
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 1.2e-39 167.5 254 48.4
TPR.G8596 Trifolium pratense HOM05D005871 ORTHO05D003654 2.6e-39 166.4 250 48.8
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.7e-38 163.7 247 52.2
TPR.G8607 Trifolium pratense HOM05D005871 ORTHO05D003654 4.6e-36 155.6 261 46.7
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 5.1e-35 152.1 236 49.2
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 3.4e-31 139.4 251 43.0
Psat2g008040 Pisum sativum HOM05D005871 ORTHO05D003654 1.3e-30 137.5 256 43.0
Psat2g007960 Pisum sativum HOM05D005871 ORTHO05D003654 2.7e-28 129.8 242 41.3
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 8.2e-25 118.2 257 37.0
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 1.0e-22 111.3 257 37.7
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 1.3e-22 110.9 230 39.6
Medtr3g058890 Medicago truncatula HOM05D005871 ORTHO05D003654 2.2e-22 110.2 172 43.6
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 1.9e-21 107.1 248 40.7
arahy.Tifrunner.gnm1.ann1.C2C6BR Arachis hypogaea HOM05D005871 ORTHO05D003654 5.5e-21 105.5 97 58.8
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 1.6e-20 104.0 230 39.6
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 1.6e-20 104.0 256 34.8
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 1.4e-19 100.9 195 43.1
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 3.9e-19 99.4 243 37.4
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.1e-18 97.8 193 38.9
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 1.1e-18 97.8 236 35.6
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.0e-18 97.1 238 36.6
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 3.3e-18 96.3 231 36.4
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.8e-17 93.2 231 39.0
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 3.7e-17 92.8 238 37.8
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 3.7e-17 92.8 232 36.2
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 6.3e-17 92.0 224 34.8
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 3.1e-16 89.7 266 34.6
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 2.0e-15 87.0 257 35.4
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.6e-15 86.7 230 35.7
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 7.7e-15 85.1 232 32.8
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.0e-14 84.7 245 37.1
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.2e-14 83.6 235 36.6
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 3.8e-14 82.8 240 35.8
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 6.5e-14 82.0 208 36.1
Actinidia02292 Actinidia chinensis HOM05D005871 ORTHO05D003654 1.9e-13 80.5 237 33.3
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 1.2e-12 77.8 248 33.9
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.6e-12 77.4 231 35.1
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 1.6e-12 77.4 235 36.2
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 2.7e-12 76.6 231 35.9
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.6e-12 76.3 224 32.1
Psat5g169200 Pisum sativum HOM05D005871 ORTHO05D003654 1.0e-11 74.7 144 42.4
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.3e-11 73.6 247 34.8
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 6.7e-11 72.0 232 30.6
CiPaw.09G107300 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.2e-10 71.2 206 35.9
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 1.5e-10 70.9 208 32.7
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 1.5e-10 70.9 236 30.5
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 2.6e-10 70.1 233 34.3
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 5.7e-10 68.9 216 34.3
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.5e-10 68.6 231 33.3
Psat5g169160 Pisum sativum HOM05D005871 ORTHO05D003654 7.5e-10 68.6 156 39.7
Ah.04g166520 Amaranthus hybridus HOM05D005871 ORTHO05D003654 9.7e-10 68.2 234 32.1
Cc09_g00530 Coffea canephora HOM05D005871 ORTHO05D003654 9.7e-10 68.2 249 30.9
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 9.7e-10 68.2 262 29.4
MD00G1057200 Malus domestica HOM05D005871 ORTHO05D003654 1.3e-09 67.8 224 34.8
CANSAT11G0434 Cannabis sativa HOM05D005871 ORTHO05D003654 1.7e-09 67.4 93 47.3
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 2.8e-09 66.6 231 30.3
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 2.8e-09 66.6 238 32.4
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 6.3e-09 65.5 192 33.9
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 8.2e-09 65.1 226 30.1
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.1e-08 64.7 193 34.7
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.4e-08 64.3 239 31.8
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 1.4e-08 64.3 235 31.9
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 1.4e-08 64.3 251 30.7
Eucgr.F02055 Eucalyptus grandis HOM05D005871 ORTHO05D003654 2.4e-08 63.5 235 30.6
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 2.4e-08 63.5 230 28.3
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 4.1e-08 62.8 220 30.9
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 5.3e-08 62.4 240 29.6
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 7.0e-08 62.0 207 30.4
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 7.0e-08 62.0 160 36.9
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 1.2e-07 61.2 226 27.9
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.2e-07 61.2 169 34.3
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 1.2e-07 61.2 169 34.3
AUR62017078 Chenopodium quinoa HOM05D005871 ORTHO05D003654 2.0e-07 60.5 187 34.8
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 2.0e-07 60.5 276 31.5
Aqoxy1G04240 Aquilegia oxysepala HOM05D005871 ORTHO05D003654 2.7e-07 60.1 206 30.1
SalBow8G3140 Salvia bowleyana HOM05D005871 ORTHO05D003654 2.7e-07 60.1 206 35.0
THA.LOC104810289 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 2.7e-07 60.1 190 33.2
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 4.5e-07 59.3 218 30.7
CsaV3_7G015020 Cucumis sativus L. HOM05D005871 ORTHO05D003654 7.7e-07 58.5 195 31.3
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 7.7e-07 58.5 205 28.3
Sc16g0008000 Simmondsia chinensis HOM05D005871 ORTHO05D003654 7.7e-07 58.5 254 28.0
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 1.0e-06 58.2 209 32.1
A05p36410 Brassica napus HOM05D010616 ORTHO05D003654 1.3e-06 57.8 187 31.6
BraA05t22441Z Brassica rapa HOM05D010616 ORTHO05D003654 1.3e-06 57.8 174 32.8
BcaB06g25485 Brassica carinata HOM05D010616 ORTHO05D003654 1.7e-06 57.4 176 32.4
Cpa.g.sc12.163 Carica papaya HOM05D005871 ORTHO05D003654 1.7e-06 57.4 228 33.8
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 1.7e-06 57.4 205 29.3
CAN.G337.14 Capsicum annuum HOM05D033747 ORTHO05D033984 2.2e-06 57.0 225 30.7
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.2e-06 57.0 204 34.3
Thhalv10021559m.g Eutrema salsugineum HOM05D010616 ORTHO05D003654 2.9e-06 56.6 196 32.1
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 3.8e-06 56.2 249 28.5
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 3.8e-06 56.2 207 29.5
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 8.5e-06 55.1 204 30.4
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 8.5e-06 55.1 200 33.0


User provided reference genes

Program Settings